Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORA62.1-201ENST00000364287 154 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORD116-11-201ENST00000383882 92 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 RNU6-886P-201ENST00000384319 105 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORA70.10-201ENST00000384515 134 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORA75.6-201ENST00000391318 127 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 ARF4P3-201ENST00000397387 509 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORA77-201ENST00000408716 125 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC012065.2-201ENST00000421295 375 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 MRPS18CP6-201ENST00000423587 223 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 AL451139.1-201ENST00000434718 346 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 RPS7P5-201ENST00000441482 581 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AL353752.1-201ENST00000454946 260 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC007686.1-201ENST00000488511 463 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 RN7SL591P-201ENST00000496150 292 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 HMGB1P35-201ENST00000503360 598 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC026784.1-201ENST00000507986 352 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 HIGD1AP13-201ENST00000509878 289 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 SNORA81.3-201ENST00000517283 198 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 SETP7-201ENST00000552169 453 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 MIR4775-201ENST00000581168 75 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 SS18L2P2-201ENST00000583960 235 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.86□□□□□ -1.63
SLC38A3Q99624 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC38A3Q99624 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC38A3Q99624 ADAM5-202ENST00000399789 1942 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC099654.2-201ENST00000433031 1980 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 RNA5SP443-201ENST00000363083 132 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 RNU6-493P-201ENST00000391321 108 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC110754.1-201ENST00000399740 601 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 TMSB4XP8-201ENST00000402089 135 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 RNU2-22P-201ENST00000411266 212 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 TMSB4XP6-201ENST00000415187 135 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC243428.1-201ENST00000421099 264 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 TMSB4XP1-201ENST00000424567 135 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AL031663.1-201ENST00000437445 219 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AL138787.1-202ENST00000437804 898 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 RPL7P5-201ENST00000471472 736 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC114801.2-201ENST00000503825 781 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 IGKV2D-23-201ENST00000518179 286 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 IGHV3-76-201ENST00000522465 295 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC068446.3-201ENST00000555285 382 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 NDUFB4P11-201ENST00000560510 395 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC018552.3-201ENST00000567416 561 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC130289.1-201ENST00000577321 73 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AC019206.1-201ENST00000621938 425 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 AL442639.1-201ENST00000625030 1899 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 SDAD1P1-202ENST00000524156 2051 ntBASIC4.85□□□□□ -1.63
SLC38A3Q99624 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC38A3Q99624 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC38A3Q99624 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms