Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 FP236240.3-201ENST00000623061 327 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 SNORA51.6-201ENST00000384151 125 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PKP4Q99569 RPS7P15-201ENST00000415804 584 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 MTCO3P12-201ENST00000416718 547 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 MRPS10P2-201ENST00000431226 381 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PKP4Q99569 AC127537.2-201ENST00000439258 465 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 MTATP6P23-201ENST00000440153 476 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.73□□□□□ -1.81
PKP4Q99569 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.73□□□□□ -1.81
PKP4Q99569 AL500522.2-201ENST00000448562 343 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AL672167.3-201ENST00000465951 960 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 RN7SL323P-201ENST00000494712 295 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 UBE2CP3-201ENST00000502715 450 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 RN7SKP298-201ENST00000515950 94 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 SNORA31.20-201ENST00000517111 133 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.73□□□□□ -1.81
PKP4Q99569 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.73□□□□□ -1.81
PKP4Q99569 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 CCNG2P1-201ENST00000549521 1000 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.73□□□□□ -1.81
PKP4Q99569 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 AL133241.1-201ENST00000556832 487 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 CYCSP2-201ENST00000558168 301 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 MIR548AB-201ENST00000584917 84 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.73□□□□□ -1.81
PKP4Q99569 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.73□□□□□ -1.81
PKP4Q99569 AC015871.2-201ENST00000603605 948 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AC024941.1-201ENST00000612250 334 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AC095031.1-201ENST00000623685 672 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AC231657.1-201ENST00000624313 397 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.73□□□□□ -1.81
PKP4Q99569 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 NUP58P1-201ENST00000502546 1738 ntBASIC3.73□□□□□ -1.81
PKP4Q99569 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PKP4Q99569 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
PKP4Q99569 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 GDI2P1-201ENST00000429312 1336 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC244517.1-201ENST00000606030 2086 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PKP4Q99569 RNA5SP479-201ENST00000364858 117 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 RNA5SP235-201ENST00000365411 114 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.72□□□□□ -1.81
PKP4Q99569 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 RNU6-259P-201ENST00000383999 107 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 MIR1193-201ENST00000408109 78 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 HMGB1P11-201ENST00000413899 637 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 AC083875.1-201ENST00000419509 405 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP4Q99569 SNORA71B-202ENST00000439232 272 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP4Q99569 RPS20P24-201ENST00000457473 361 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC010285.1-201ENST00000470580 392 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC084198.1-201ENST00000477747 402 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AP000797.1-201ENST00000478870 387 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC013828.1-201ENST00000481845 158 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC138853.1-201ENST00000503549 823 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AC093767.1-201ENST00000504523 156 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 RAC1P2-201ENST00000511164 579 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms