Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 CBX3P3-201ENST00000508108 532 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 RNU6-1102P-201ENST00000516149 96 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.59□□□□□ -1.99
VAT1Q99536 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 EIF4BP1-201ENST00000554881 351 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 ZNF92P2-201ENST00000600543 1059 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 AC006249.1-201ENST00000621223 471 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
VAT1Q99536 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
VAT1Q99536 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.59□□□□□ -2
VAT1Q99536 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VAT1Q99536 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
VAT1Q99536 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.58□□□□□ -2
VAT1Q99536 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 RNU6-792P-201ENST00000363490 107 ntBASIC2.58□□□□□ -2
VAT1Q99536 SNORA80A-201ENST00000363922 136 ntBASIC2.58□□□□□ -2
VAT1Q99536 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VAT1Q99536 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
VAT1Q99536 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.58□□□□□ -2
VAT1Q99536 AL139039.1-201ENST00000401900 692 ntBASIC2.58□□□□□ -2
VAT1Q99536 CYCSP45-201ENST00000402289 315 ntBASIC2.58□□□□□ -2
VAT1Q99536 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.58□□□□□ -2
VAT1Q99536 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.58□□□□□ -2
VAT1Q99536 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.58□□□□□ -2
VAT1Q99536 RPL23AP16-201ENST00000441715 421 ntBASIC2.58□□□□□ -2
VAT1Q99536 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.58□□□□□ -2
VAT1Q99536 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.58□□□□□ -2
VAT1Q99536 AC109471.1-201ENST00000511631 612 ntBASIC2.58□□□□□ -2
VAT1Q99536 ZNF705CP-201ENST00000530515 889 ntBASIC2.58□□□□□ -2
VAT1Q99536 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 AC106791.2-201ENST00000604680 391 ntBASIC2.58□□□□□ -2
VAT1Q99536 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
VAT1Q99536 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 OR2AS2P-201ENST00000606902 342 ntBASIC2.58□□□□□ -2
VAT1Q99536 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
VAT1Q99536 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.58□□□□□ -2
VAT1Q99536 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.58□□□□□ -2
VAT1Q99536 CRYM-AS1-204ENST00000637983 556 ntBASIC2.58□□□□□ -2
VAT1Q99536 MFSD8-245ENST00000641743 948 ntBASIC2.58□□□□□ -2
VAT1Q99536 NUP58P1-201ENST00000502546 1738 ntBASIC2.58□□□□□ -2
VAT1Q99536 AC090740.1-201ENST00000623193 2262 ntBASIC2.57□□□□□ -2
VAT1Q99536 CUL1P1-201ENST00000509510 2425 ntBASIC2.57□□□□□ -2
VAT1Q99536 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.57□□□□□ -2
VAT1Q99536 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
VAT1Q99536 RNU6-481P-201ENST00000384194 107 ntBASIC2.57□□□□□ -2
VAT1Q99536 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
VAT1Q99536 RNA5SP184-201ENST00000411071 108 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
VAT1Q99536 RAP1BP1-201ENST00000412709 553 ntBASIC2.57□□□□□ -2
VAT1Q99536 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
VAT1Q99536 MTCO1P39-201ENST00000426148 480 ntBASIC2.57□□□□□ -2
VAT1Q99536 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.57□□□□□ -2
VAT1Q99536 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.57□□□□□ -2
VAT1Q99536 ARL5AP4-201ENST00000430731 512 ntBASIC2.57□□□□□ -2
VAT1Q99536 RSL24D1P8-201ENST00000434442 492 ntBASIC2.57□□□□□ -2
VAT1Q99536 HSFY3P-201ENST00000444242 1191 ntBASIC2.57□□□□□ -2
VAT1Q99536 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.57□□□□□ -2
VAT1Q99536 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 GTF2IP12-201ENST00000456547 356 ntBASIC2.57□□□□□ -2
VAT1Q99536 CDC42P1-201ENST00000456658 548 ntBASIC2.57□□□□□ -2
VAT1Q99536 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 MTCO3P2-201ENST00000457365 171 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC093767.1-201ENST00000504523 156 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
VAT1Q99536 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 EEF1B2P4-201ENST00000551398 348 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.57□□□□□ -2
VAT1Q99536 MED28P6-201ENST00000558776 231 ntBASIC2.57□□□□□ -2
VAT1Q99536 RN7SL622P-201ENST00000585292 275 ntBASIC2.57□□□□□ -2
VAT1Q99536 VN1R90P-201ENST00000595717 726 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.57□□□□□ -2
VAT1Q99536 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.57□□□□□ -2
VAT1Q99536 GAS5-AS1-201ENST00000602767 694 ntBASIC2.57□□□□□ -2
VAT1Q99536 AL160237.3-201ENST00000604114 1013 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC106028.5-201ENST00000610332 395 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC003001.2-201ENST00000616294 831 ntBASIC2.57□□□□□ -2
VAT1Q99536 AP003122.6-201ENST00000623831 495 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC006386.2-201ENST00000624491 75 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC012005.1-201ENST00000624575 75 ntBASIC2.57□□□□□ -2
VAT1Q99536 AC011460.1-201ENST00000636268 1834 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.56□□□□□ -2
VAT1Q99536 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
VAT1Q99536 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.56□□□□□ -2
VAT1Q99536 AC062016.1-201ENST00000355719 319 ntBASIC2.56□□□□□ -2
VAT1Q99536 RNU6-115P-201ENST00000364310 107 ntBASIC2.56□□□□□ -2
VAT1Q99536 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VAT1Q99536 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms