Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 RPL7P46-201ENST00000425129 740 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AL391646.1-201ENST00000603860 190 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 SDR42E1P3-201ENST00000438345 502 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 RNU6-717P-201ENST00000459076 104 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AP001804.3-201ENST00000525146 880 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AL356575.1-201ENST00000603008 283 ntBASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.56□□□□□ -2.16
CSMD1Q96PZ7 RNA5SP457-201ENST00000363657 124 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNA5SP344-201ENST00000411081 104 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AP000852.1-201ENST00000472460 573 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RPL23AP55-201ENST00000498163 452 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNA5SP385-201ENST00000515947 110 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AC007536.1-201ENST00000533382 349 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AC105429.2-201ENST00000610567 517 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNA5SP139-201ENST00000364340 117 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 SNORA51.12-201ENST00000384448 134 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 PTP4A1P6-201ENST00000531034 478 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RN7SL793P-201ENST00000583259 296 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 PWAR6-201ENST00000552334 4618 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNU6-37P-201ENST00000362692 107 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNU6-11P-201ENST00000364234 107 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RNU2-20P-201ENST00000410425 191 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AC002524.1-201ENST00000411687 547 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AC244505.5-201ENST00000443639 207 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 SSXP1-201ENST00000453640 473 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 OR4G1P-201ENST00000588632 938 ntBASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CSMD1Q96PZ7 AC092326.2-201ENST00000624772 1561 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 ARPC3P1-201ENST00000437218 533 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AL589765.3-201ENST00000446084 462 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 MTCYBP17-201ENST00000503579 789 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC243773.3-201ENST00000613270 256 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 MTCYBP31-201ENST00000438855 1122 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 RPS15AP36-201ENST00000492022 382 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AL121821.2-201ENST00000556081 394 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AL133216.2-202ENST00000634512 349 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 MIR3074-201ENST00000384885 81 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 RNA5SP402-201ENST00000517148 110 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AL389895.1-201ENST00000554127 252 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC103987.3-201ENST00000582071 292 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 AC010678.1-201ENST00000614118 713 ntBASIC1.54□□□□□ -2.16
CSMD1Q96PZ7 MIR548J-201ENST00000408833 112 ntBASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 AP000553.5-201ENST00000641933 54 ntBASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 RNY1P4-201ENST00000384595 115 ntBASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 CALM1P2-201ENST00000452941 448 ntBASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD1Q96PZ7 DYNLT3P1-201ENST00000378574 347 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 DNAJC19P6-201ENST00000401853 280 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC244033.1-201ENST00000426826 870 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 TRIAP1P1-201ENST00000427062 225 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC104435.1-201ENST00000483483 166 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC021382.1-201ENST00000483523 359 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 RNA5SP395-201ENST00000516567 118 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 AC011712.1-201ENST00000588959 234 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 VN1R7P-201ENST00000619242 903 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 RPL23AP61-201ENST00000623642 466 ntBASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
CSMD1Q96PZ7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 RNA5SP62-201ENST00000363457 110 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 RPL31P2-201ENST00000413849 377 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms