Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC104417.1-201ENST00000523974 751 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC092451.2-201ENST00000538746 658 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC008507.2-201ENST00000588402 1176 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC106900.2-201ENST00000604994 317 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 BNIP3P19-201ENST00000605397 577 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 CYCSP41-201ENST00000616920 296 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC010975.3-201ENST00000618727 978 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC006249.1-201ENST00000621223 471 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AL157770.1-201ENST00000623049 439 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 AC084035.1-201ENST00000634543 607 ntBASIC3.06□□□□□ -1.92
RPRD1AQ96P16 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RPRD1AQ96P16 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 RNU6-236P-201ENST00000363886 106 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 SNORA44-201ENST00000384584 132 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 UBA52P6-201ENST00000399822 382 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 RPL7P30-201ENST00000420888 709 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC093155.1-201ENST00000440164 826 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC092757.1-201ENST00000467293 467 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC008837.1-201ENST00000511513 412 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 SCGB1D5P-201ENST00000515134 247 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 OR5G4P-201ENST00000525251 760 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC087894.1-201ENST00000538359 518 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC087897.1-201ENST00000550134 156 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 DNAJC8P1-201ENST00000554535 372 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 MED28P6-201ENST00000558776 231 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AL445435.1-201ENST00000604232 665 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AL627309.6-201ENST00000606857 840 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC135507.2-201ENST00000612443 309 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AC073348.1-201ENST00000623002 331 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AP000676.4-201ENST00000624659 623 ntBASIC3.05□□□□□ -1.92
RPRD1AQ96P16 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.05□□□□□ -1.92
RPRD1AQ96P16 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AP002907.1-201ENST00000606361 1430 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 RPS15AP38-201ENST00000413110 372 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 EEF1A1P41-201ENST00000414667 207 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 PSMA6P3-201ENST00000428242 164 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 Z82190.1-201ENST00000454534 490 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 OR4G11P-201ENST00000492842 939 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AC080014.1-201ENST00000496877 1201 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AC138915.2-201ENST00000569776 97 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 AC015871.2-201ENST00000603605 948 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
RPRD1AQ96P16 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
RPRD1AQ96P16 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RPRD1AQ96P16 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms