Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SNORA70.13-201ENST00000516116 138 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 BNIP3P5-201ENST00000562290 498 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC136932.1-201ENST00000574771 208 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 MIR4300-201ENST00000581016 96 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC068790.4-201ENST00000602474 263 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AL590099.1-201ENST00000615276 138 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AL034546.1-201ENST00000623740 3693 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC015799.1-201ENST00000622996 3122 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AP000560.1-201ENST00000624150 1937 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-960P-201ENST00000364056 120 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.233-201ENST00000364407 101 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.568-201ENST00000384742 113 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1193-201ENST00000408109 78 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC017079.2-201ENST00000416102 485 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AL590139.1-201ENST00000416267 400 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 UBE2V1P4-201ENST00000425374 344 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 EZH2P1-201ENST00000431167 291 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 REG1CP-206ENST00000447469 496 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 PRDX3P3-201ENST00000447765 522 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 snoU13.7-201ENST00000459220 104 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 RN7SL354P-201ENST00000469282 294 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC108078.2-201ENST00000510750 236 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 FAM60DP-201ENST00000524174 632 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC009643.1-201ENST00000532030 391 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR4433B-201ENST00000581329 102 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC012443.1-201ENST00000605605 231 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC007619.2-201ENST00000605743 379 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1244-1-201ENST00000612829 85 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AC034102.8-201ENST00000615146 484 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 AL359547.2-201ENST00000615810 418 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR376A1-201ENST00000616574 68 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1244-3-201ENST00000635744 85 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1244-2-201ENST00000636449 85 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1244-4-202ENST00000636813 85 ntBASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP3BQ96NU0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC008725.1-201ENST00000605123 2263 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC009643.2-201ENST00000603543 1448 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC011455.2-201ENST00000599320 3336 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 RNA5SP388-201ENST00000362584 119 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-434P-201ENST00000384376 107 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-658P-201ENST00000384606 106 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 RNU11-201ENST00000387069 134 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.586-201ENST00000391146 98 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC116036.1-201ENST00000412199 367 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 RPL23AP36-201ENST00000413895 458 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC093414.1-201ENST00000434712 514 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL590399.4-201ENST00000436561 601 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC008267.6-201ENST00000441664 139 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AP000942.1-201ENST00000463969 747 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms