Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC004924.1-201ENST00000480160 781 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC084024.2-201ENST00000503480 791 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 RNU6-27P-201ENST00000516146 107 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 ARL2BPP5-201ENST00000523141 481 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 ELOCP29-201ENST00000588193 334 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC106791.2-201ENST00000604680 391 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AC009570.1-201ENST00000609599 745 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 MIR8084-201ENST00000614105 89 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 CR381653.2-201ENST00000624041 768 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.82□□□□□ -1.96
C9orf72Q96LT7 AL121594.5-201ENST00000631724 573 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
C9orf72Q96LT7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 MIR26A1-201ENST00000362205 77 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 SNORD116-23-201ENST00000384645 92 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 CYCSP45-201ENST00000402289 315 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 TAF13P2-201ENST00000416876 286 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 BOLA3P4-201ENST00000418151 400 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 RPS20P5-201ENST00000434808 360 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 OR51B8P-201ENST00000449892 769 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 VN1R104P-201ENST00000505115 1009 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AC006390.1-201ENST00000508068 283 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 HIGD1AP13-201ENST00000509878 289 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 RNU6-885P-201ENST00000516607 104 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 GTF3AP2-201ENST00000557014 266 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 MIR4789-201ENST00000577469 82 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 DUXAP4-201ENST00000603046 613 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AC091925.2-201ENST00000625059 256 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 AC233263.6-201ENST00000631132 1963 ntBASIC2.81□□□□□ -1.96
C9orf72Q96LT7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf72Q96LT7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 RNU6-353P-201ENST00000364266 108 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 SNORA51.6-201ENST00000384151 125 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 RNU6-932P-201ENST00000391108 106 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 FAT1P1-201ENST00000406588 507 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AL645937.1-202ENST00000421799 937 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 FAM204CP-201ENST00000424489 642 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 DEFB130D-201ENST00000426866 237 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 RPL23AP58-201ENST00000440453 469 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 RPS24P13-201ENST00000442520 397 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AL050341.1-201ENST00000447743 313 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 RPL23AP20-201ENST00000447965 421 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 UBE2DNL-203ENST00000474922 222 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC069306.1-201ENST00000507006 843 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC098799.2-201ENST00000509466 868 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC024224.1-201ENST00000538284 609 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC093519.1-201ENST00000566109 298 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC002487.1-201ENST00000604565 994 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC026741.1-201ENST00000605892 482 ntBASIC2.8□□□□□ -1.96
C9orf72Q96LT7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf72Q96LT7 AC009487.2-201ENST00000420969 6821 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 CUL1P1-201ENST00000509510 2425 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 RNU6-251P-201ENST00000363235 104 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 RNU6-799P-201ENST00000363567 107 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 U6.112-201ENST00000384129 70 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 RPL19P1-201ENST00000411635 428 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 BX664727.1-201ENST00000416024 466 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 SFR1P2-201ENST00000421841 730 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 MTCO1P39-201ENST00000426148 480 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC000041.1-201ENST00000439655 175 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 RPL30P14-201ENST00000482744 348 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AP001025.2-201ENST00000490908 477 ntBASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf72Q96LT7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms