Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 DHX40P1-201ENST00000588725 1412 ntBASIC6.22□□□□□ -1.41
TRIM47Q96LD4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM47Q96LD4 AC144833.1-201ENST00000567953 4089 ntBASIC6.21□□□□□ -1.41
TRIM47Q96LD4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
TRIM47Q96LD4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
TRIM47Q96LD4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM47Q96LD4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AC134882.1-201ENST00000603738 1676 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-1266P-201ENST00000362794 105 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-666P-201ENST00000363499 107 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-1059P-201ENST00000363752 98 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-1317P-201ENST00000364582 104 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-804P-201ENST00000384286 107 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNU6-441P-201ENST00000384545 106 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL031679.1-201ENST00000400616 525 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL133482.1-201ENST00000415988 498 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 UBE2D3P2-201ENST00000424409 445 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RPL7P37-201ENST00000425095 738 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RPS24P8-201ENST00000431490 402 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RPL23AP22-201ENST00000437556 453 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RPS7P5-201ENST00000441482 581 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL596266.1-201ENST00000448132 400 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 TPT1P12-201ENST00000448968 492 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 OR2AQ1P-201ENST00000451972 200 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AC026410.2-201ENST00000460281 156 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AC109925.1-201ENST00000478069 331 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 EIF3KP3-201ENST00000514461 639 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNA5SP373-201ENST00000517271 95 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AC004584.2-201ENST00000570407 410 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AC234771.5-201ENST00000600161 514 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 HMGN2P28-201ENST00000606102 262 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 AL365222.1-201ENST00000614661 98 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 RNA5SP439-201ENST00000617595 124 ntBASIC6.21□□□□□ -1.42
TRIM47Q96LD4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM47Q96LD4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 HSPA8P1-201ENST00000425843 1833 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 RNU6-1298P-201ENST00000362456 101 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 RNY3P11-201ENST00000364153 102 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AL590139.1-201ENST00000416267 400 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC096920.1-201ENST00000423991 241 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 MRPS18BP2-201ENST00000434310 759 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 OR4C10P-201ENST00000434991 931 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 RPL21P104-201ENST00000464143 478 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 RN7SL385P-201ENST00000468873 276 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 DEFB108E-201ENST00000524692 240 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AP005403.1-201ENST00000579720 229 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC011477.5-201ENST00000586571 259 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AL355877.2-201ENST00000603670 358 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AL357559.1-201ENST00000622228 274 ntBASIC6.2□□□□□ -1.42
TRIM47Q96LD4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
TRIM47Q96LD4 AC006484.1-201ENST00000435086 1884 ntBASIC6.19□□□□□ -1.42
TRIM47Q96LD4 AC074029.4-201ENST00000624796 1859 ntBASIC6.19□□□□□ -1.42
TRIM47Q96LD4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM47Q96LD4 AC009313.2-201ENST00000417893 1941 ntBASIC6.19□□□□□ -1.42
TRIM47Q96LD4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM47Q96LD4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM47Q96LD4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM47Q96LD4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms