Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 DCAF13P1-201ENST00000495256 1330 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.36□□□□□ -1.71
SNX27Q96L92 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 AP002001.2-201ENST00000529025 1469 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC092447.10-201ENST00000620607 1652 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNA5SP258-201ENST00000362750 119 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 Y_RNA.359-201ENST00000365498 102 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNU6-533P-201ENST00000384144 107 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 SNORD51-201ENST00000384320 80 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNU6-1207P-201ENST00000384343 107 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNA5SP239-201ENST00000410218 129 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AL356583.2-201ENST00000426536 280 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 EZH2P1-201ENST00000431167 291 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC091862.1-201ENST00000438016 1100 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 SKP1P1-201ENST00000438081 489 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 FAM103A2P-201ENST00000444122 354 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 USP9YP12-201ENST00000450481 570 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AL590365.1-201ENST00000450788 243 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 SSXP1-201ENST00000453640 473 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 RN7SL585P-201ENST00000470538 280 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RN7SL293P-201ENST00000481765 281 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SNX27Q96L92 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SNX27Q96L92 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 RNU1-95P-201ENST00000516357 160 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNU1-128P-201ENST00000516704 160 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 RNU6-714P-201ENST00000516963 103 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 EEF1B2P4-201ENST00000551398 348 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 CBX3P5-201ENST00000552017 521 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC120057.2-201ENST00000571520 271 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 MIR4644-201ENST00000579929 84 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 AC122108.2-201ENST00000611946 526 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX27Q96L92 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 AC009509.4-201ENST00000619202 509 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 CRYM-AS1-204ENST00000637983 556 ntBASIC4.35□□□□□ -1.71
SNX27Q96L92 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX27Q96L92 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX27Q96L92 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX27Q96L92 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX27Q96L92 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX27Q96L92 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SNX27Q96L92 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX27Q96L92 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX27Q96L92 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX27Q96L92 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX27Q96L92 SNORA5A-201ENST00000384111 134 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 MTCO3P41-201ENST00000414801 328 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 CDK8P2-201ENST00000415020 547 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AC006548.1-201ENST00000427470 102 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AL353691.1-201ENST00000451332 387 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AL645939.1-201ENST00000453429 797 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 RPL21P11-201ENST00000461458 483 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 KC877373.1-201ENST00000479066 408 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX27Q96L92 OR4R3P-201ENST00000525084 838 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AP002963.1-201ENST00000530590 184 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC091516.1-201ENST00000549191 703 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SNX27Q96L92 AC004853.1-201ENST00000604902 698 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AL592436.1-201ENST00000605135 558 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 AC011816.2-201ENST00000607089 556 ntBASIC4.34□□□□□ -1.71
SNX27Q96L92 U3.45-201ENST00000607547 219 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms