Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 ASNSP1-201ENST00000518311 1939 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 CEP170P1-201ENST00000502249 4587 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 HMGB1P17-201ENST00000403495 628 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RPL6P29-201ENST00000414863 865 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 HMGB3P20-201ENST00000417997 600 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC008280.1-201ENST00000418851 412 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RPS29P33-201ENST00000456717 146 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 PMCHL2-203ENST00000457791 237 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 APOOP2-201ENST00000461561 539 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RPS29P25-201ENST00000481709 171 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 MTCO2P30-201ENST00000503662 364 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 TMEM251P1-201ENST00000503717 318 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RNA5SP228-201ENST00000516232 133 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RNU6-1003P-201ENST00000517099 105 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 OR5AL2P-201ENST00000532185 920 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 TOMM20P2-201ENST00000540082 421 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 CBX3P5-201ENST00000552017 521 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AL138976.2-201ENST00000563989 694 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 MAGOH2P-202ENST00000584384 429 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 RPL12P25-202ENST00000598100 674 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 NRBF2P5-201ENST00000603087 788 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 AL732618.1-201ENST00000623251 301 ntBASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM2Q96JY6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PDLIM2Q96JY6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.34□□□□□ -1.72
PDLIM2Q96JY6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDLIM2Q96JY6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL158163.1-201ENST00000603915 1649 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC138915.3-201ENST00000562908 1389 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 SNORD56.2-201ENST00000363242 71 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RN7SKP44-201ENST00000363602 316 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 Y_RNA.263-201ENST00000364659 114 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 Y_RNA.535-201ENST00000384612 99 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RNU6-952P-201ENST00000391164 108 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RPS20P2-201ENST00000402520 389 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RPL37P1-201ENST00000432310 284 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 CBX1P1-201ENST00000440184 427 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 ARPC3P5-201ENST00000448802 534 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 S100A11P1-201ENST00000477525 312 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RN7SL481P-201ENST00000477764 299 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 RNU6-1281P-201ENST00000516223 105 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 CENPUP1-201ENST00000526649 1202 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AP003181.2-201ENST00000528941 181 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC025627.2-201ENST00000576220 160 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AC078795.3-201ENST00000602913 472 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL391646.1-201ENST00000603860 190 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AL136295.6-201ENST00000610486 658 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 AP005019.3-201ENST00000620418 560 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 MFSD8-216ENST00000641147 4009 ntBASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM2Q96JY6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM2Q96JY6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM2Q96JY6 ZNF680P1-201ENST00000436625 1469 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms