Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 MTCO3P16-201ENST00000454456 754 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 RPS3AP50-201ENST00000487064 803 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC118282.1-201ENST00000506408 765 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 RN7SKP287-201ENST00000516546 266 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 RNU6-840P-201ENST00000517275 65 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 DUXAP2-201ENST00000519198 589 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 OR7K1P-201ENST00000546439 926 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 RPL23AP84-201ENST00000571193 464 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 BNIP3P23-201ENST00000599655 511 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC093424.1-201ENST00000604999 338 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC091167.4-201ENST00000605079 184 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC097468.3-201ENST00000607956 456 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC019176.2-201ENST00000611579 315 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC244100.1-202ENST00000621554 382 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC004777.1-201ENST00000624317 287 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC011460.1-201ENST00000636268 1834 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SKA1Q96BD8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SKA1Q96BD8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 RNU6-1200P-201ENST00000384162 107 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 MTND4P13-201ENST00000402078 1023 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 SNORA11.1-201ENST00000408133 129 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 RPL30P2-201ENST00000414021 291 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC018630.2-202ENST00000422992 927 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC010099.3-201ENST00000423896 409 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 YME1L1P1-201ENST00000429435 297 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 RSU1P2-202ENST00000437884 485 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC104978.1-201ENST00000449387 391 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 RPL32P34-201ENST00000486380 400 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 GMPSP1-201ENST00000514075 579 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 SNORA31.1-201ENST00000515993 133 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 SNORA31.5-201ENST00000516190 133 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 SNORD59.2-201ENST00000516873 68 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 ELOCP32-201ENST00000548625 324 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC002400.1-201ENST00000569310 726 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 MIR3186-201ENST00000577404 85 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC021171.1-201ENST00000603137 706 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SKA1Q96BD8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC104454.1-201ENST00000421341 1401 ntBASIC3.92□□□□□ -1.78
SKA1Q96BD8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.92□□□□□ -1.78
SKA1Q96BD8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SKA1Q96BD8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 MAPK10-373ENST00000641983 6772 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SKA1Q96BD8 RNU6-223P-201ENST00000362830 107 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 RNU6-432P-201ENST00000384196 109 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 RNU6-754P-201ENST00000391166 107 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 RAB9AP3-201ENST00000412737 573 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC098592.1-201ENST00000419352 333 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC008850.1-201ENST00000427546 362 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 SKP1P1-201ENST00000438081 489 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 RAB9AP1-201ENST00000449393 573 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 PDSS1P2-201ENST00000449397 678 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC098824.1-201ENST00000453565 980 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 MTCO3P20-201ENST00000454926 688 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC084357.1-201ENST00000473404 255 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 RNU6-798P-201ENST00000516912 103 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC087276.1-201ENST00000529659 480 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC023161.2-201ENST00000551218 780 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 ISCA1P3-201ENST00000577104 373 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC060771.1-201ENST00000582031 164 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.91□□□□□ -1.78
SKA1Q96BD8 BNIP3P38-201ENST00000601117 544 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AL450489.1-201ENST00000612071 468 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AC008121.2-201ENST00000614647 523 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 AL591424.2-201ENST00000617023 128 ntBASIC3.91□□□□□ -1.78
SKA1Q96BD8 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms