Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 Y_RNA.516-201ENST00000384541 124 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL356867.1-201ENST00000429623 299 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 FCF1P1-201ENST00000432690 571 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC024082.2-201ENST00000434771 238 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 RPL23AP52-201ENST00000439311 478 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 RPL7AP28-201ENST00000464513 571 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AP000926.1-201ENST00000479573 241 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC105137.1-201ENST00000484355 562 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 RN7SL810P-201ENST00000493031 276 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC004062.1-201ENST00000509926 645 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 MTCO1P35-201ENST00000515270 228 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 SNORA31.8-201ENST00000516327 108 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 RNA5SP360-201ENST00000516555 118 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC022616.3-201ENST00000523940 148 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL359212.1-201ENST00000556608 614 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 AP002826.1-201ENST00000608835 315 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC103710.2-201ENST00000609912 942 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC017083.3-201ENST00000609955 700 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 uc_338.13-201ENST00000618243 179 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC006338.1-201ENST00000618453 749 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL445567.2-201ENST00000618935 498 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AL023881.1-201ENST00000621088 301 ntBASIC5.66□□□□□ -1.5
ZNF428Q96B54 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF428Q96B54 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF428Q96B54 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF428Q96B54 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF428Q96B54 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 SNORD56.2-201ENST00000363242 71 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 RNU6-960P-201ENST00000364056 120 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 RN7SKP159-201ENST00000410657 292 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC011933.1-201ENST00000413334 321 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 PDSS1P1-201ENST00000422953 1114 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC104651.1-201ENST00000427559 735 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 SNRPGP5-201ENST00000456003 220 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC116533.1-201ENST00000459748 321 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL359273.1-201ENST00000510918 627 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC021146.3-201ENST00000511911 260 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 RNA5SP468-201ENST00000516782 93 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC100770.1-201ENST00000532310 322 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 SNRPGP16-201ENST00000533275 226 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF428Q96B54 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF428Q96B54 OR4H12P-201ENST00000556269 907 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 MIR1254-2-201ENST00000579553 63 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AF038458.1-201ENST00000588406 262 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC174048.1-201ENST00000603389 144 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL109618.2-201ENST00000605527 211 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC098614.4-201ENST00000607601 462 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL391813.2-201ENST00000609113 322 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AL158209.2-201ENST00000619266 216 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 CR381653.2-201ENST00000624041 768 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 AC068880.5-201ENST00000624331 290 ntBASIC5.65□□□□□ -1.5
ZNF428Q96B54 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF428Q96B54 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ZNF428Q96B54 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF428Q96B54 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF428Q96B54 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF428Q96B54 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ZNF428Q96B54 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF428Q96B54 OR4G2P-201ENST00000328113 903 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF428Q96B54 RNU6-1120P-201ENST00000362988 108 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 RNU6-181P-201ENST00000363225 107 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 RNA5SP28-201ENST00000363841 119 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 RNU1-132P-201ENST00000364300 164 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 RNU6-169P-201ENST00000365336 107 ntBASIC5.64□□□□□ -1.51
ZNF428Q96B54 CIR1P3-201ENST00000405137 479 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms