Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ELOCP18-201ENST00000434209 337 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.84□□□□□ -1.63
ERCC4Q92889 TPT1P14-201ENST00000448018 505 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC053481.1-201ENST00000467217 306 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 RN7SL738P-201ENST00000470264 297 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC083798.1-201ENST00000472671 131 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC055855.1-201ENST00000489563 579 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC079382.1-201ENST00000493346 557 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC020593.1-201ENST00000507399 299 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC022616.3-201ENST00000523940 148 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AP003497.1-201ENST00000528472 562 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AL109766.1-201ENST00000555080 552 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AL359212.1-201ENST00000556608 614 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC090615.1-201ENST00000577519 154 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC069061.3-201ENST00000582254 823 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC079587.1-201ENST00000603846 277 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AL353621.2-201ENST00000605340 133 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC012603.1-201ENST00000606424 528 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC009033.1-201ENST00000624279 431 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC079597.1-201ENST00000624306 508 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC009161.2-201ENST00000624626 138 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 MIR3662-201ENST00000637030 95 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC4Q92889 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC4Q92889 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.84□□□□□ -1.64
ERCC4Q92889 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ERCC4Q92889 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC4Q92889 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 Y_RNA.160-201ENST00000363677 92 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 RNY3P3-201ENST00000363816 102 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 Y_RNA.813-201ENST00000364639 102 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 SNORD82-201ENST00000365530 70 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 MIR3065-201ENST00000390137 79 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AL356776.1-201ENST00000406574 447 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AC004987.3-201ENST00000413879 771 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC4Q92889 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AC098614.3-201ENST00000438957 440 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 RPL23AP52-201ENST00000439311 478 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 H2AFZP6-201ENST00000444403 394 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC104308.1-201ENST00000454621 333 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AC022034.3-201ENST00000471393 478 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 HMGN1P12-201ENST00000499125 195 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC4Q92889 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC090572.1-201ENST00000519251 160 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC084783.1-201ENST00000565846 910 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC4Q92889 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 AL009028.1-201ENST00000604895 802 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 MIR432-201ENST00000606207 94 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC4Q92889 AC008013.2-202ENST00000637965 364 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ERCC4Q92889 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.83□□□□□ -1.64
ERCC4Q92889 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.83□□□□□ -1.64
ERCC4Q92889 MFSD8-216ENST00000641147 4009 ntBASIC4.83□□□□□ -1.64
ERCC4Q92889 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC4Q92889 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC4Q92889 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC4Q92889 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC4Q92889 RNU6-451P-201ENST00000362921 107 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 RNU6-108P-201ENST00000365558 107 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ERCC4Q92889 SNORA20.2-201ENST00000383922 131 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 ENSAP1-201ENST00000392855 326 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC4Q92889 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC4Q92889 RPL7P54-201ENST00000438336 674 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC4Q92889 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 RAD23BP3-201ENST00000454157 1152 ntBASIC4.82□□□□□ -1.64
ERCC4Q92889 snoU13.8-201ENST00000458890 104 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms