Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SNORD9-201ENST00000362566 104 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RNU4-28P-201ENST00000364739 141 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 SNORA62.3-201ENST00000365110 153 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL591034.1-201ENST00000407447 340 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 HIGD1AP15-201ENST00000416198 280 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 MTCO2P21-201ENST00000419780 677 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RPL21P32-201ENST00000419877 477 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 NEK4P1-201ENST00000433383 879 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC007389.2-201ENST00000434630 306 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 SNRPEP7-201ENST00000438350 220 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 ANKRD26P4-201ENST00000455755 950 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RN7SL542P-201ENST00000467147 294 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC118282.1-201ENST00000506408 765 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 CBX3P3-201ENST00000508108 532 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 MTCYBP43-201ENST00000513621 740 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC023050.2-201ENST00000544968 387 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC009097.3-201ENST00000563557 1018 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL031281.1-201ENST00000604049 488 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC034229.4-201ENST00000607861 441 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC106028.5-201ENST00000610332 395 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 AC119674.1-207ENST00000641355 633 ntBASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKAP2Q8WWK9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 RNU6-777P-201ENST00000364265 104 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 Y_RNA.548-201ENST00000384656 105 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC004866.2-201ENST00000438285 481 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AL591719.1-201ENST00000444669 744 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 RSL24D1P3-201ENST00000449255 495 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 SNORA84-201ENST00000459229 133 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 HMGB1P36-201ENST00000487709 576 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC105185.1-201ENST00000518705 535 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC239860.2-201ENST00000525886 270 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AL354943.1-201ENST00000572103 781 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 BDH2P1-201ENST00000602288 736 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AL596327.1-201ENST00000603629 213 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC092354.2-201ENST00000607786 514 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 SNORD39.4-201ENST00000620099 78 ntBASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CKAP2Q8WWK9 CR383658.2-201ENST00000547576 1525 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AL359837.1-201ENST00000381357 287 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 PIGPP2-201ENST00000411569 458 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 XKRYP1-201ENST00000423438 492 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 BX119904.4-201ENST00000424402 301 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 XKRYP2-201ENST00000432915 492 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AL121871.1-201ENST00000443413 436 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms