Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MTND4P34-201ENST00000572715 1371 ntBASIC1.4□□□□□ -2.18
ALMS1Q8TCU4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC073310.1-201ENST00000423226 1033 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC090953.1-201ENST00000604305 1092 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 MIR4255-201ENST00000579351 72 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 DUXAP4-201ENST00000603046 613 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC009501.3-201ENST00000605001 1352 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 RNU2-17P-201ENST00000410290 190 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 OR4P1P-201ENST00000530808 1136 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 AC060766.3-201ENST00000591442 263 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 RMST_2.1-201ENST00000617263 136 ntBASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.4□□□□□ -2.19
ALMS1Q8TCU4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 MIR337-201ENST00000362281 93 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RNU1-109P-201ENST00000383960 147 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 SNORA40.18-201ENST00000391200 128 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 MTND2P2-201ENST00000434633 945 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC092436.3-201ENST00000511788 257 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RNU6-56P-201ENST00000516986 93 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AP000790.1-201ENST00000528891 737 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 KPNA2P1-201ENST00000458289 1591 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RNY1P10-201ENST00000363268 113 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AL358453.1-201ENST00000422522 250 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 MTCO3P21-201ENST00000430791 643 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AL445669.2-201ENST00000454425 421 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RNU6-964P-201ENST00000516524 69 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 RPL23AP78-201ENST00000599928 470 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AL360085.1-201ENST00000604713 532 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC009237.8-201ENST00000445492 379 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 MTAPP1-201ENST00000489154 819 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 AC009831.4-201ENST00000620744 325 ntBASIC1.39□□□□□ -2.19
ALMS1Q8TCU4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC090515.1-201ENST00000465295 476 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AL161713.1-201ENST00000555538 145 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC091057.2-201ENST00000602594 792 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 MTND5P12-201ENST00000502851 1449 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 HMGB1P10-201ENST00000395823 563 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 GZMAP1-201ENST00000503054 631 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 TBCAP3-201ENST00000512475 312 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 MIR514B-201ENST00000516774 80 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 RN7SKP96-201ENST00000516948 297 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 BTBD10P2-201ENST00000404779 676 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 ZNF271P-202ENST00000465539 1970 ntBASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
ALMS1Q8TCU4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 SNORD21-201ENST00000383953 95 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 HMGB1P12-201ENST00000438594 598 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 OR51B8P-201ENST00000449892 769 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AC233279.1-201ENST00000455300 423 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AC017007.3-201ENST00000479865 435 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 OR4R2P-201ENST00000530815 597 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 AC068790.3-201ENST00000602988 553 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.37□□□□□ -2.19
ALMS1Q8TCU4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms