Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SNAP23P1-201ENST00000433229 246 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AL691482.1-201ENST00000453255 87 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC008083.2-201ENST00000546707 476 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 OR11H5P-201ENST00000554039 926 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 MIR4700-201ENST00000578311 74 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 MIR4737-201ENST00000583979 81 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AL031320.1-201ENST00000604177 357 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC004832.4-201ENST00000608952 331 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC099654.2-201ENST00000433031 1980 ntBASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD1Q8NHV4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RNU6-1290P-201ENST00000362957 109 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RNA5SP36-201ENST00000410197 133 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RNU6-272P-201ENST00000411028 104 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RPS24P8-201ENST00000431490 402 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 HIGD1AP11-201ENST00000438361 280 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RPL36AP15-201ENST00000444514 266 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC026410.2-201ENST00000460281 156 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RPL23AP56-201ENST00000460778 453 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 SNORA25.11-201ENST00000515935 105 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 Y_RNA.683-201ENST00000516508 93 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RNU6-570P-201ENST00000517051 105 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AP003497.1-201ENST00000528472 562 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AC020910.3-201ENST00000603701 874 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 AL450345.1-202ENST00000605741 3881 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 DHX40P1-201ENST00000588725 1412 ntBASIC5.82□□□□□ -1.48
NEDD1Q8NHV4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC244517.1-201ENST00000606030 2086 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 SNORD58.1-201ENST00000391313 66 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC133473.1-201ENST00000455173 299 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RPL21P71-201ENST00000465598 459 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC104563.1-201ENST00000476147 376 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC055855.1-201ENST00000489563 579 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RPS23P1-201ENST00000491662 432 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC090453.1-201ENST00000495560 436 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 TXNP6-201ENST00000510190 310 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AP000907.2-201ENST00000530827 353 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC073657.2-201ENST00000605661 303 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AL049794.2-201ENST00000616301 365 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 uc_338.12-201ENST00000616344 181 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 U6.104-201ENST00000637979 90 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC025125.1-201ENST00000624743 1922 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 AC093311.1-201ENST00000506586 2021 ntBASIC5.81□□□□□ -1.48
NEDD1Q8NHV4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms