Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 U3.37-201ENST00000408528 213 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RPS15AP12-201ENST00000419498 388 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MTCYBP24-201ENST00000420387 1106 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RPL30P3-201ENST00000424262 333 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RPL5P13-201ENST00000462840 709 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC111000.5-201ENST00000506559 1178 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RPL7P20-201ENST00000520308 745 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNA5SP425-201ENST00000410336 112 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 VN1R17P-201ENST00000472048 1090 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 SCARNA16.3-201ENST00000516595 184 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNA5SP309-201ENST00000516670 106 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 HMGB1P41-201ENST00000520234 440 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 OR7K1P-201ENST00000546439 926 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MIR4285-201ENST00000581001 85 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 SNRPGP19-201ENST00000603826 189 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 PSMD5-AS1-215ENST00000640622 205 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU1-73P-201ENST00000383971 164 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 SNORD88.1-201ENST00000408684 91 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MTND2P16-201ENST00000419987 799 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC092427.1-202ENST00000430569 476 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC104090.1-201ENST00000506341 1171 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MIR6895-201ENST00000613497 78 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC097714.1-201ENST00000511272 1647 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MTND5P28-201ENST00000438005 1594 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-673P-201ENST00000365084 104 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RN7SKP58-201ENST00000411010 305 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC022884.3-201ENST00000579571 248 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC010615.3-201ENST00000597319 394 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AL356575.1-201ENST00000603008 283 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC004241.3-201ENST00000611728 517 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AL355596.1-201ENST00000565399 3996 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 Y_RNA.224-201ENST00000364308 111 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-1-201ENST00000383898 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-36P-201ENST00000384172 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-4P-201ENST00000384205 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-5P-201ENST00000384238 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-3P-201ENST00000384314 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-2-201ENST00000384627 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-9-201ENST00000384776 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-33P-201ENST00000384793 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MIR9-3-201ENST00000385084 90 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC027124.2-201ENST00000428249 105 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC093716.1-201ENST00000435923 377 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RSL24D1P2-201ENST00000445584 366 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AC108078.2-201ENST00000510750 236 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RAC1P5-201ENST00000512182 576 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-347P-201ENST00000516658 105 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RPL23AP78-201ENST00000599928 470 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 RNU6-6P-201ENST00000606623 107 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 AL512283.1-201ENST00000606756 1384 ntBASIC0.68□□□□□ -2.3
SYNE1Q8NF91 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNA5SP37-201ENST00000365420 130 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNU6-1181P-201ENST00000384191 106 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AP000567.1-201ENST00000406413 156 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LUZP4P1-201ENST00000415420 344 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC005005.2-201ENST00000420779 380 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RFESDP1-201ENST00000422350 461 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC128687.1-201ENST00000605304 619 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC090425.2-201ENST00000608818 501 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNU2-25P-201ENST00000411041 191 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 NUP35P2-201ENST00000416748 943 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 XKRYP6-201ENST00000440468 1116 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 XKRYP3-201ENST00000442113 1116 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC092754.2-201ENST00000463506 460 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC007182.2-201ENST00000489251 402 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms