Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AL138880.2-201ENST00000616214 239 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC078880.5-201ENST00000617845 421 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC073968.1-201ENST00000618594 637 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MTND2P41-201ENST00000637599 773 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC090740.1-201ENST00000623193 2262 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 RNU6-730P-201ENST00000383954 104 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 RNA5SP252-201ENST00000391131 119 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 RPS4XP3-201ENST00000398541 413 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AC007954.1-201ENST00000554198 494 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AC106782.4-201ENST00000568264 210 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 GLUD1P4-201ENST00000590914 418 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AL121594.5-201ENST00000631724 573 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 AC244517.1-201ENST00000606030 2086 ntBASIC2.78□□□□□ -1.96
CDKL3Q8IVW4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL672167.1-206ENST00000356293 943 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL137014.1-201ENST00000420490 1226 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC009237.2-201ENST00000421358 284 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 RPL23AP74-201ENST00000437246 471 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL050341.1-201ENST00000447743 313 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 SNORA31.8-201ENST00000516327 108 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 OR10V3P-201ENST00000525712 725 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LSM6P2-201ENST00000552208 177 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDKL3Q8IVW4 SGO1P1-201ENST00000603525 1447 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC109315.1-201ENST00000584143 1347 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC130650.2-201ENST00000618736 2403 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 GNG5P1-201ENST00000255500 204 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RNU6-353P-201ENST00000364266 108 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RNU6-468P-201ENST00000384003 109 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RNU6-207P-201ENST00000384137 107 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 SNORA1.3-201ENST00000384676 136 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 MIR16-1-201ENST00000385271 89 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 MTND4LP20-201ENST00000402379 270 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AL121978.1-201ENST00000402778 359 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 TAF13P2-201ENST00000416876 286 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC234064.1-201ENST00000436312 247 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AL135938.1-201ENST00000443141 297 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC234775.1-201ENST00000454247 670 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RPL23AP31-201ENST00000456160 467 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms