Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC007599.1-201ENST00000568688 1174 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 ROCK1P1-201ENST00000573767 549 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AL139286.1-201ENST00000604465 483 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AL590282.1-201ENST00000610379 1136 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RNA5SP50-201ENST00000363731 107 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RNU6-629P-201ENST00000384061 103 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RNU6-769P-201ENST00000384407 104 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 U3.20-201ENST00000390909 217 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AL021407.1-201ENST00000404531 386 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC073063.1-201ENST00000434352 607 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RSU1P2-202ENST00000437884 485 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC092641.1-201ENST00000440229 772 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 FAM103A2P-201ENST00000444122 354 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RPL7P36-201ENST00000444633 681 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RPL31P3-201ENST00000458430 332 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 SNORD105B-201ENST00000458770 79 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RPL31P13-201ENST00000484151 370 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC109486.1-201ENST00000486833 374 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 MLLT10P2-201ENST00000506434 249 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC117522.2-201ENST00000510049 657 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC116347.2-201ENST00000514912 523 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RN7SKP13-201ENST00000515933 244 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 IGKV2-38-201ENST00000517443 247 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 HMGN1P28-201ENST00000521340 364 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AL356057.1-201ENST00000533798 831 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 ACTR3BP3-201ENST00000565577 979 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC034268.2-201ENST00000571784 482 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 MIR4307-201ENST00000582802 84 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 OR2AS2P-201ENST00000606902 342 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC093591.3-201ENST00000634516 308 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 AC119674.1-207ENST00000641355 633 ntBASIC4.11□□□□□ -1.75
HERC6Q8IVU3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERC6Q8IVU3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC116096.1-201ENST00000566804 2314 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC096664.2-201ENST00000411843 406 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 RPL17P12-201ENST00000413391 526 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 RPL21P66-201ENST00000426566 466 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC129850.1-201ENST00000436203 508 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 RPS24P6-201ENST00000452670 400 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 MTND4LP18-201ENST00000526864 291 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC091489.2-201ENST00000566263 604 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC011260.1-201ENST00000578420 472 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 PIGPP4-201ENST00000584447 307 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC008507.1-201ENST00000587506 734 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC083760.1-201ENST00000589621 670 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AP000403.1-201ENST00000603349 851 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AC091965.4-201ENST00000607691 587 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AL713922.2-201ENST00000619384 716 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
HERC6Q8IVU3 PABPC1P9-201ENST00000426076 1612 ntBASIC4.1□□□□□ -1.75
HERC6Q8IVU3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms