Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC141257.3-201ENST00000572906 215 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MIR5187-201ENST00000583479 76 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL603755.1-201ENST00000619504 163 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC009039.2-201ENST00000624524 529 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC099063.3-201ENST00000642066 185 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 RNU1-18P-201ENST00000363062 164 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 EI24P2-201ENST00000397776 1076 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 RPL36AP36-201ENST00000418616 301 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AL117351.1-201ENST00000438864 766 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AL133162.1-201ENST00000463228 453 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC072039.1-201ENST00000477611 581 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC111000.2-201ENST00000507775 550 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 RNA5SP143-201ENST00000516936 115 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 MTCO1P49-201ENST00000523429 802 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC007954.1-201ENST00000554198 494 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC006960.3-201ENST00000561845 705 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 MIR3921-201ENST00000577308 85 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC013444.2-201ENST00000603317 787 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AP003122.6-201ENST00000623831 495 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 FAM35DP-201ENST00000323387 2712 ntBASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NUP54Q7Z3B4 AC092447.10-201ENST00000620607 1652 ntBASIC3.46□□□□□ -1.85
NUP54Q7Z3B4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 DEFB108F-201ENST00000344638 222 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RNU6-500P-201ENST00000362349 107 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 MIR493-201ENST00000385254 89 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RNA5SP424-201ENST00000390988 115 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC025750.1-201ENST00000399891 379 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 SSXP9-201ENST00000417503 292 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 HSPE1P1-201ENST00000421494 318 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC007389.2-201ENST00000434630 306 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 MTCYBP39-201ENST00000437562 491 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 OR6C5P-201ENST00000452388 923 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RNU7-125P-201ENST00000458760 62 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 FTH1P2-201ENST00000466086 412 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RPL30P6-201ENST00000475925 342 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 TRBV12-2-201ENST00000489763 344 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 CBX3P3-201ENST00000508108 532 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RAC1P2-201ENST00000511164 579 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 MTND5P4-201ENST00000514978 288 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 RNU6-232P-201ENST00000517144 64 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 NARSP2-201ENST00000518524 679 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 DEFB108D-201ENST00000527787 222 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC068587.4-201ENST00000533893 186 ntBASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.46□□□□□ -1.86
NUP54Q7Z3B4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms