Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC30Q5VVM6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC30Q5VVM6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 RNU6-757P-201ENST00000410334 100 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 HIGD1AP15-201ENST00000416198 280 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL353678.1-201ENST00000422735 741 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 ELOCP23-201ENST00000452014 332 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 RPL31P50-201ENST00000471002 296 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 FAM172BP-201ENST00000487497 1089 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC096751.1-202ENST00000502691 1067 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 RNA5SP216-201ENST00000516111 123 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC009097.3-201ENST00000563557 1018 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC090615.1-201ENST00000577519 154 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL390208.1-201ENST00000605885 644 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AL592295.2-201ENST00000612578 206 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CCDC30Q5VVM6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 RIOK3P1-201ENST00000418778 1528 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 RNU6-28P-201ENST00000362378 107 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL008987.1-201ENST00000415528 237 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MTCO2P21-201ENST00000419780 677 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL137014.1-201ENST00000420490 1226 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 DUTP6-201ENST00000425573 462 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL512649.1-201ENST00000428997 581 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 HMGB3P11-201ENST00000440127 604 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 Z99127.3-201ENST00000448158 395 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AL353691.1-201ENST00000451332 387 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 snoU13.4-201ENST00000458916 104 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC078785.3-201ENST00000476607 425 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MTND2P14-201ENST00000482139 351 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC023424.2-201ENST00000493479 777 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MIR3200-201ENST00000580767 85 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC006254.3-201ENST00000603353 884 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 TUSC7.1-201ENST00000610969 165 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC138932.5-201ENST00000617759 563 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC011330.2-201ENST00000621680 635 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC30Q5VVM6 AC007496.3-201ENST00000624987 3443 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 SNORD113-6-201ENST00000363345 75 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 RNU6-1155P-201ENST00000363554 107 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 MIR184-201ENST00000384962 84 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 RNU6-952P-201ENST00000391164 108 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 SNRPEP7-201ENST00000438350 220 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 HMGB1P15-201ENST00000453854 435 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 RN7SL863P-201ENST00000462370 296 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AC017015.1-201ENST00000477387 286 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AC093278.1-201ENST00000494700 600 ntBASIC4.11□□□□□ -1.75
CCDC30Q5VVM6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms