Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 SNORD3E-201ENST00000362899 217 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RNU6-1287P-201ENST00000362914 107 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RNU6-1060P-201ENST00000384664 107 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AL391417.1-201ENST00000404100 426 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RPL23AP38-201ENST00000423801 469 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 BX323845.1-201ENST00000432417 179 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RPS29P7-201ENST00000439662 171 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC007967.1-201ENST00000455422 1159 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RPL36AP13-201ENST00000457490 317 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 SNORD97-201ENST00000459187 142 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MTATP8P1-201ENST00000467115 207 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC068769.1-201ENST00000474767 2426 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC091912.1-201ENST00000511351 248 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC026801.2-201ENST00000515352 425 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RNU6-189P-201ENST00000516120 101 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC135001.1-201ENST00000544546 283 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AL669831.4-202ENST00000590817 238 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC006115.2-201ENST00000596823 202 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC019176.2-201ENST00000611579 315 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC099669.2-201ENST00000616549 437 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MIR6875-201ENST00000617506 72 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MIR6864-201ENST00000617935 70 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AC010378.1-201ENST00000619270 362 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AL162373.1-201ENST00000620433 407 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MIR3653-201ENST00000625572 110 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 AL669831.3-213ENST00000636676 183 ntBASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 TPTE2P4-201ENST00000258589 1605 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 SCARNA15-201ENST00000607520 4325 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.364-201ENST00000365532 101 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RNU5E-6P-201ENST00000365574 115 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 SNORA75B-201ENST00000384053 137 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.646-201ENST00000410980 101 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 HMGB3P2-201ENST00000411913 584 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL356387.2-201ENST00000422272 243 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RPL7P46-201ENST00000425129 740 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 CALM2P2-201ENST00000428512 440 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL160004.2-201ENST00000432935 350 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RPL23AP89-201ENST00000439324 255 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 CYCSP32-201ENST00000440548 321 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RPL23AP93-201ENST00000440847 484 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC128713.1-201ENST00000471495 306 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL049873.1-201ENST00000480540 376 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 FAM60DP-201ENST00000524174 632 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL133153.1-201ENST00000557756 303 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 RN7SL802P-201ENST00000577858 299 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 MIR5583-1-201ENST00000580941 59 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC004696.1-201ENST00000614345 607 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AL590099.1-201ENST00000615276 138 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL13A1Q5TAT6 AC004656.1-201ENST00000568479 4951 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms