Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC099522.1-202ENST00000514718 367 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AP003392.2-201ENST00000527269 208 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MIR3146-201ENST00000580367 79 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC068790.4-201ENST00000602474 263 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC007038.2-201ENST00000608095 740 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC013562.2-201ENST00000611632 603 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MIR6130-201ENST00000619419 109 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 PISRT1-201ENST00000626175 531 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC110994.2-201ENST00000635481 492 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 MFSD8-216ENST00000641147 4009 ntBASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.82□□□□□ -1.8
RUNDC3AQ59EK9 AC139713.2-214ENST00000642059 1811 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 FARSBP1-201ENST00000435808 1778 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 Y_RNA.41-201ENST00000362646 102 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 SNORA7.2-201ENST00000364446 145 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 U3.22-201ENST00000391120 215 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 MIR1251-201ENST00000408552 70 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-516P-201ENST00000411381 104 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC245028.1-201ENST00000423259 256 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 TIMM9P1-201ENST00000436122 256 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC073614.1-201ENST00000438690 650 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 RPL23AP24-201ENST00000458203 385 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 RN7SL481P-201ENST00000477764 299 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 CDC42P4-201ENST00000510507 563 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 RNA5SP143-201ENST00000516936 115 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 RNU6-430P-201ENST00000517078 107 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC125611.2-201ENST00000551907 647 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL391156.1-201ENST00000554965 554 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 TVP23BP1-201ENST00000557500 617 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL133153.1-201ENST00000557756 303 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 MIR4715-201ENST00000584117 79 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 MIR5684-201ENST00000585074 65 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC234771.5-201ENST00000600161 514 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL022099.1-201ENST00000604551 712 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL161729.4-201ENST00000604650 476 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC087241.4-201ENST00000612441 480 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AC091834.1-201ENST00000614543 472 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 AL732618.1-201ENST00000623251 301 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 MTND5P29-201ENST00000458676 1807 ntBASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
RUNDC3AQ59EK9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 XIAPP3-201ENST00000312918 795 ntBASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 RNU5E-1-201ENST00000362477 120 ntBASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
RUNDC3AQ59EK9 AC019097.1-201ENST00000424783 735 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms