Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 FGF7P2-201ENST00000332473 296 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 RNU6-50P-201ENST00000362356 103 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 CCNG1P1-201ENST00000406783 885 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 RNA5SP129-201ENST00000410276 118 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 RNU4-65P-201ENST00000410473 140 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL358472.1-201ENST00000431295 329 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 RPL23AP14-201ENST00000468281 468 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AP001086.1-201ENST00000494882 321 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 RNA5SP468-201ENST00000516782 93 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AP002748.2-201ENST00000528671 348 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 CYCSP29-201ENST00000533731 318 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC125611.2-201ENST00000551907 647 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 MED28P6-201ENST00000558776 231 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 MIR5047-201ENST00000579212 100 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC022146.1-201ENST00000595307 847 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 MLECP1-201ENST00000615893 709 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 MIR6830-201ENST00000636015 70 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC38Q502W7 AC005832.2-201ENST00000538921 1430 ntBASIC4.12□□□□□ -1.75
CCDC38Q502W7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC38Q502W7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC38Q502W7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 RNU6-223P-201ENST00000362830 107 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 RNU5E-8P-201ENST00000363502 116 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 RNU6-76P-201ENST00000384060 104 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 RNU6-432P-201ENST00000384196 109 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 MIR1251-201ENST00000408552 70 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 RN7SKP142-201ENST00000411236 328 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 PPP1R11P2-201ENST00000423543 382 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 MTND1P28-201ENST00000435623 950 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 MTCO2P16-201ENST00000436962 677 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC092641.1-201ENST00000440229 772 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 RPS4XP4-201ENST00000443195 763 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 TAF9P1-201ENST00000445421 515 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 TAF9P2-201ENST00000454958 515 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC135721.1-201ENST00000497954 479 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC004069.2-201ENST00000505438 1114 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 DEFB108D-201ENST00000527787 222 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC38Q502W7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL356432.3-201ENST00000568952 465 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC023575.1-201ENST00000580510 358 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 MIR5684-201ENST00000585074 65 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC073544.2-201ENST00000601155 540 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC020910.2-201ENST00000603635 610 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC011468.4-201ENST00000603942 409 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL358072.1-201ENST00000604156 575 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC007038.2-201ENST00000608095 740 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC093838.1-201ENST00000613014 469 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC092140.2-201ENST00000618027 521 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AL159972.1-201ENST00000625150 448 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 AC019226.1-201ENST00000625666 515 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms