Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC244100.1-202ENST00000621554 382 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC019278.1-201ENST00000623516 479 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC009033.1-201ENST00000624279 431 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSRP1Q08945 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.03□□□□□ -1.6
SSRP1Q08945 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSRP1Q08945 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SSRP1Q08945 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 HSPE1P11-201ENST00000339579 310 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 Y_RNA.381-201ENST00000365666 102 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 RNU6-39P-201ENST00000384344 107 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 MT-TL1-201ENST00000386347 75 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RNU6-754P-201ENST00000391166 107 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 EIF1P3-201ENST00000423841 334 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 RPL23AP52-201ENST00000439311 478 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AL671855.1-201ENST00000446875 1203 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 ABCF2P2-201ENST00000450549 296 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RPL36AP13-201ENST00000457490 317 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RPL23AP24-201ENST00000458203 385 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC006463.2-201ENST00000473326 348 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RN7SL459P-201ENST00000481078 302 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RPS3AP50-201ENST00000487064 803 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.02□□□□□ -1.61
SSRP1Q08945 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.02□□□□□ -1.61
SSRP1Q08945 RNU6-1095P-201ENST00000516148 108 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 SNORA40.12-201ENST00000516329 111 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 RNU2-10P-201ENST00000516375 211 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.02□□□□□ -1.61
SSRP1Q08945 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.02□□□□□ -1.61
SSRP1Q08945 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.02□□□□□ -1.61
SSRP1Q08945 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.02□□□□□ -1.61
SSRP1Q08945 OR4K8P-201ENST00000578842 1048 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC233702.9-201ENST00000581528 203 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC012669.1-201ENST00000603209 283 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AL603758.1-201ENST00000618654 241 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC007546.1-201ENST00000619452 559 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 YWHAEP7-203ENST00000622054 312 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 AC006065.5-201ENST00000623427 349 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC055839.1-201ENST00000634467 498 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 CKAP2P1-201ENST00000555477 2049 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.02□□□□□ -1.61
SSRP1Q08945 MTND5P3-201ENST00000438536 1800 ntBASIC5.02□□□□□ -1.61
SSRP1Q08945 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSRP1Q08945 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSRP1Q08945 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSRP1Q08945 Z73965.1-201ENST00000623412 2297 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RNU6-511P-201ENST00000363496 107 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RNY3P3-201ENST00000363816 102 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RNU6-1158P-201ENST00000391167 107 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RNU6-712P-201ENST00000410558 100 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 ELOCP19-201ENST00000411919 318 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 GTF2IP20-201ENST00000431663 360 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RPS20P5-201ENST00000434808 360 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AC016696.1-201ENST00000446949 318 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 RPL7P23-201ENST00000493874 747 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 STMN1P2-201ENST00000508435 439 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 OR51K1P-201ENST00000510214 950 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.01□□□□□ -1.61
SSRP1Q08945 RNU6-835P-201ENST00000516974 104 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 DEFB108D-201ENST00000527787 222 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC008745.1-201ENST00000604064 271 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 RNA5SP108-201ENST00000605921 117 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms