Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC019155.1-201ENST00000382242 574 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 Y_RNA.389-201ENST00000383924 113 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 RNU6-821P-201ENST00000390995 107 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 Z99755.1-201ENST00000414048 380 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
PCDH1Q08174 RPS23P10-201ENST00000416185 486 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 RPS26P47-201ENST00000427219 348 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AL161722.2-201ENST00000434731 981 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 GSTM5P1-201ENST00000434751 660 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH1Q08174 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH1Q08174 SNORD5.1-201ENST00000458800 75 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 AC087884.1-201ENST00000469738 328 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC022133.1-201ENST00000490961 571 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 RN7SL101P-201ENST00000496350 279 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC022493.2-201ENST00000506122 481 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 Y_RNA.721-201ENST00000517207 102 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AP004607.2-201ENST00000533949 322 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC026371.1-201ENST00000551867 419 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH1Q08174 AL162431.4-201ENST00000604674 411 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AC104695.2-201ENST00000605056 775 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 MIR133B-201ENST00000362210 119 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 SNORD62.1-201ENST00000362541 86 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 RNA5SP335-201ENST00000363817 110 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 MIR143-201ENST00000385300 106 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC092447.6-201ENST00000414578 210 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AL591704.1-201ENST00000432574 275 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 MRPS18BP2-201ENST00000434310 759 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.16□□□□□ -1.58
PCDH1Q08174 HMGB3P30-201ENST00000457863 606 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC023141.9-201ENST00000458734 412 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 RPL7P23-201ENST00000493874 747 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AL136038.1-201ENST00000497246 351 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 RN7SL466P-201ENST00000497546 295 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC096745.1-201ENST00000509945 370 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 SCARNA16.2-201ENST00000516520 172 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC027544.3-201ENST00000535082 757 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AC174048.1-201ENST00000603389 144 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC092447.9-201ENST00000603395 144 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AL121612.2-201ENST00000612261 482 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AC109309.2-201ENST00000612597 332 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 AL359547.2-201ENST00000615810 418 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDH1Q08174 PHKBP1-201ENST00000450951 1951 ntBASIC5.16□□□□□ -1.58
PCDH1Q08174 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
PCDH1Q08174 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH1Q08174 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH1Q08174 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH1Q08174 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH1Q08174 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDH1Q08174 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms