Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL356280.1-201ENST00000603614 379 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 HMGN2P28-201ENST00000606102 262 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.67□□□□□ -2.14
TFF3Q07654 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
TFF3Q07654 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TFF3Q07654 HSPE1P11-201ENST00000339579 310 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 RNU6-457P-201ENST00000363999 107 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 NPM1P10-201ENST00000398310 865 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TFF3Q07654 RPL17P12-201ENST00000413391 526 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.66□□□□□ -2.14
TFF3Q07654 SUMO1P4-201ENST00000429430 302 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.66□□□□□ -2.14
TFF3Q07654 ELOCP13-201ENST00000443934 329 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AL590664.1-201ENST00000448065 339 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 MTND4LP12-201ENST00000448237 295 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.66□□□□□ -2.14
TFF3Q07654 AC007182.2-201ENST00000489251 402 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.66□□□□□ -2.14
TFF3Q07654 AC011352.3-201ENST00000505162 593 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 RN7SKP40-201ENST00000517211 242 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.66□□□□□ -2.14
TFF3Q07654 COX6CP5-201ENST00000527162 228 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 OR4U1P-201ENST00000554958 912 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 MIR4474-201ENST00000579189 78 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 MIR4448-201ENST00000584360 86 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.66□□□□□ -2.14
TFF3Q07654 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.66□□□□□ -2.14
TFF3Q07654 VN1R74P-201ENST00000613259 503 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 OR1S1-201ENST00000624470 978 ntBASIC1.66□□□□□ -2.14
TFF3Q07654 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.66□□□□□ -2.14
TFF3Q07654 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.66□□□□□ -2.14
TFF3Q07654 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
TFF3Q07654 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
TFF3Q07654 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
TFF3Q07654 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TFF3Q07654 AL139276.1-201ENST00000311910 1001 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.65□□□□□ -2.15
TFF3Q07654 MTCO1P43-201ENST00000431831 488 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.65□□□□□ -2.15
TFF3Q07654 HMGN2P20-201ENST00000437531 273 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 CBWD4P-201ENST00000445695 655 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AC239798.3-201ENST00000454459 408 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
TFF3Q07654 FAM172BP-201ENST00000487497 1089 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.65□□□□□ -2.15
TFF3Q07654 RNU2-58P-201ENST00000516403 183 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.15
TFF3Q07654 AC234775.3-201ENST00000564612 656 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.65□□□□□ -2.15
TFF3Q07654 BNIP3P8-201ENST00000597863 560 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AP004372.1-201ENST00000604842 844 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.65□□□□□ -2.15
TFF3Q07654 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.65□□□□□ -2.15
TFF3Q07654 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TFF3Q07654 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.65□□□□□ -2.15
TFF3Q07654 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TFF3Q07654 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TFF3Q07654 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TFF3Q07654 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.64□□□□□ -2.15
TFF3Q07654 BX682237.1-201ENST00000415016 335 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.64□□□□□ -2.15
TFF3Q07654 HMGN2P38-201ENST00000423806 265 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AL353729.1-201ENST00000425044 720 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 MORF4L1P7-201ENST00000426038 703 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AC022431.1-201ENST00000450941 438 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AC090515.1-201ENST00000465295 476 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
TFF3Q07654 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.64□□□□□ -2.15
TFF3Q07654 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.64□□□□□ -2.15
TFF3Q07654 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TFF3Q07654 MTCO3P24-201ENST00000572729 782 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 MIR4781-201ENST00000585250 76 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 VN1R80P-201ENST00000597126 338 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 APOOP1-201ENST00000604695 592 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AC090425.2-201ENST00000608818 501 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
TFF3Q07654 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 PABPC1P9-201ENST00000426076 1612 ntBASIC1.64□□□□□ -2.15
TFF3Q07654 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
TFF3Q07654 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TFF3Q07654 AL136164.4-201ENST00000625013 2135 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 U8.10-201ENST00000384260 133 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TFF3Q07654 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 Z82205.1-201ENST00000428456 297 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 MTCYBP14-201ENST00000457471 715 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AC090096.1-201ENST00000489168 390 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms