Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 AC063949.1-201ENST00000552900 865 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AC091042.1-201ENST00000579213 173 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 MIR4270-201ENST00000581799 70 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX4Q06945 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 AC104695.3-201ENST00000604052 296 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AC104687.2-201ENST00000604442 342 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 MIR6128-201ENST00000615528 109 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 AC055839.1-201ENST00000634467 498 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 AC093849.1-201ENST00000563631 2209 ntBASIC5.27□□□□□ -1.57
SOX4Q06945 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX4Q06945 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX4Q06945 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX4Q06945 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
SOX4Q06945 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SOX4Q06945 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SOX4Q06945 AL138820.1-201ENST00000617901 5305 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX4Q06945 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 SNORA73.1-201ENST00000363107 205 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 Y_RNA.307-201ENST00000365022 117 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 SNORD82-201ENST00000365530 70 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 RNU5E-6P-201ENST00000365574 115 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 MIR92A2-201ENST00000385299 75 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 Y_RNA.645-201ENST00000391229 102 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 RNU4-46P-201ENST00000410818 138 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 RNU4-61P-201ENST00000411243 107 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX4Q06945 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX4Q06945 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX4Q06945 AC016696.1-201ENST00000446949 318 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SOX4Q06945 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX4Q06945 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.26□□□□□ -1.57
SOX4Q06945 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SOX4Q06945 OR8R1P-201ENST00000543943 764 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.26□□□□□ -1.57
SOX4Q06945 AL049839.1-201ENST00000556151 657 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
SOX4Q06945 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX4Q06945 AL512605.2-201ENST00000592972 256 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 AL161616.1-201ENST00000611867 286 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 AL590099.1-201ENST00000615276 138 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SOX4Q06945 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.26□□□□□ -1.57
SOX4Q06945 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX4Q06945 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SOX4Q06945 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SOX4Q06945 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX4Q06945 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SOX4Q06945 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SOX4Q06945 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SOX4Q06945 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX4Q06945 RNU6-188P-201ENST00000364207 107 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 Y_RNA.496-201ENST00000384444 101 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 RNA5SP219-201ENST00000390940 113 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AL645608.4-201ENST00000423619 154 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 AC011753.3-201ENST00000443436 406 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 OR1H1P-201ENST00000448731 937 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX4Q06945 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX4Q06945 SCARNA18-201ENST00000459004 134 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AC006967.1-201ENST00000467608 589 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX4Q06945 HIGD1AP13-201ENST00000509878 289 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 Y_RNA.668-201ENST00000516233 93 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 RNU6-798P-201ENST00000516912 103 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 RNU6-699P-201ENST00000517081 110 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX4Q06945 AL133153.1-201ENST00000557756 303 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX4Q06945 RN7SL802P-201ENST00000577858 299 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 MIR4675-201ENST00000577898 77 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 MIR4330-201ENST00000579077 105 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 AC062037.2-201ENST00000610137 73 ntBASIC5.25□□□□□ -1.57
SOX4Q06945 ATP5A1P2-202ENST00000616464 443 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms