Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 RNA5SP385-201ENST00000515947 110 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC010376.1-201ENST00000522101 334 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC239860.2-201ENST00000525886 270 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 SULT1C2P1-202ENST00000562418 459 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 AL355812.1-201ENST00000603215 216 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC091946.2-201ENST00000606105 291 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 ATP5A1P2-202ENST00000616464 443 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 Z99129.2-201ENST00000619967 314 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC010338.1-201ENST00000621823 717 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC109454.4-201ENST00000623411 649 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC084035.1-201ENST00000634543 607 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 AC090897.3-201ENST00000636973 1157 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 ZNF807-201ENST00000328088 1707 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HMGCS1Q01581 AP003122.5-201ENST00000527668 3766 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HMGCS1Q01581 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
HMGCS1Q01581 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGCS1Q01581 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HMGCS1Q01581 SUGT1P1-201ENST00000379514 476 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 MIR128-1-201ENST00000384921 82 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 SNORA48.2-201ENST00000390926 124 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC016769.3-201ENST00000396562 315 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL133384.1-201ENST00000412744 351 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 OR4K6P-201ENST00000416478 897 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 DPRXP1-201ENST00000426312 460 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL390023.1-201ENST00000428836 262 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 SNRPEP4-201ENST00000435815 279 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 RSL24D1P3-201ENST00000449255 495 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL445669.2-201ENST00000454425 421 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC013828.1-201ENST00000481845 158 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 VPS26AP1-201ENST00000483197 979 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGCS1Q01581 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC022690.1-201ENST00000526681 550 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 LARP7P2-201ENST00000575306 125 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 COX6CP3-201ENST00000580869 223 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC008083.4-201ENST00000615076 444 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC073968.1-201ENST00000618594 637 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC123767.1-202ENST00000620407 817 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC095031.1-201ENST00000623685 672 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS1Q01581 AC092593.1-201ENST00000515413 1815 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 AP005901.5-201ENST00000545779 1796 ntBASIC2.74□□□□□ -1.97
HMGCS1Q01581 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 ZNF833P-201ENST00000424938 1494 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 Z99496.1-201ENST00000469424 1477 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 RNU5E-10P-201ENST00000363506 118 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 SNORD82-201ENST00000365530 70 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 ARF4P3-201ENST00000397387 509 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 RPL5P18-201ENST00000406671 891 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 RNU2-28P-201ENST00000410457 189 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AL354692.1-201ENST00000423044 315 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 UBE2D3P2-201ENST00000424409 445 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 GTF2IP7-202ENST00000436677 309 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 MTCO1P48-201ENST00000448024 1096 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC079203.1-201ENST00000487972 404 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 BOLA3P3-201ENST00000505182 232 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms