Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC117522.1-201ENST00000509821 380 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC021146.3-201ENST00000511911 260 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AL109766.1-201ENST00000555080 552 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX6-1P78426 FAM60BP-201ENST00000578364 658 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 MIR5699-201ENST00000578903 90 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 NRBF2P5-201ENST00000603087 788 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.6-201ENST00000603753 252 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.11-201ENST00000604059 253 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AC008162.1-201ENST00000604718 254 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.1-201ENST00000604752 252 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.5-201ENST00000605253 252 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.12-201ENST00000605291 253 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.8-201ENST00000605353 252 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 AL670379.7-201ENST00000605823 252 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 FAM27B-201ENST00000610601 213 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC110801.1-201ENST00000623590 212 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX6-1P78426 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NKX6-1P78426 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.15□□□□□ -1.75
NKX6-1P78426 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX6-1P78426 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NKX6-1P78426 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NKX6-1P78426 TLK1P1-201ENST00000456760 2440 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX6-1P78426 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 RNA5SP388-201ENST00000362584 119 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNU4-48P-201ENST00000365559 182 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNU5E-6P-201ENST00000365574 115 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNU6-606P-201ENST00000384721 111 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC110754.1-201ENST00000399740 601 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC097374.1-203ENST00000400783 485 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNA5SP146-201ENST00000410743 123 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RSU1P3-201ENST00000412878 835 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 JKAMPP1-201ENST00000413804 919 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 ZNF90P2-204ENST00000419323 1075 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RAC1P6-201ENST00000423911 575 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 AL606489.2-201ENST00000433886 234 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RPL21P112-201ENST00000434403 463 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RPS17P8-201ENST00000434525 335 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC024082.2-201ENST00000434771 238 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX6-1P78426 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNU6-261P-201ENST00000459506 102 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC010631.1-201ENST00000474150 156 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RN7SL41P-201ENST00000476144 297 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC026427.2-201ENST00000506228 536 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 STMN1P2-201ENST00000508435 439 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC026402.1-201ENST00000513642 170 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNU6-709P-201ENST00000517257 104 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC109635.4-202ENST00000531666 412 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC005868.1-201ENST00000536421 331 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC133555.2-201ENST00000550213 292 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX6-1P78426 OR4H12P-201ENST00000556269 907 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 NCAPGP2-201ENST00000557911 754 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX6-1P78426 AC006116.10-201ENST00000591836 581 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX6-1P78426 RNF138P2-201ENST00000603490 592 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms