Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC083923.1-201ENST00000523708 376 ntBASIC2.2□□□□□ -2.06
HIST1H3AP68431 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H3AP68431 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H3AP68431 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.2□□□□□ -2.06
HIST1H3AP68431 CKS1BP1-201ENST00000555221 240 ntBASIC2.2□□□□□ -2.06
HIST1H3AP68431 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.2□□□□□ -2.06
HIST1H3AP68431 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H3AP68431 AL137246.1-201ENST00000607072 977 ntBASIC2.2□□□□□ -2.06
HIST1H3AP68431 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H3AP68431 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H3AP68431 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H3AP68431 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
HIST1H3AP68431 AL513185.3-201ENST00000433335 1300 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL049780.3-201ENST00000624612 1583 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC135776.4-201ENST00000624300 1904 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H3AP68431 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 MIR483-201ENST00000385070 76 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 CYCSP45-201ENST00000402289 315 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL121578.1-201ENST00000428051 892 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC025750.2-201ENST00000442609 450 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 NAP1L1P3-201ENST00000462291 880 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 RPL37P25-201ENST00000507308 276 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC008716.1-201ENST00000511084 513 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 RNA5SP356-201ENST00000515972 94 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 EIF1AXP2-201ENST00000555940 413 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 MIR3609-201ENST00000582661 80 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC079089.3-201ENST00000603094 673 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL035413.2-201ENST00000604801 525 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 MIR7106-201ENST00000612419 65 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL161629.2-201ENST00000615347 275 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC068722.2-201ENST00000618734 544 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC006386.2-201ENST00000624491 75 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AC012005.1-201ENST00000624575 75 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 CYP3A51P-201ENST00000633513 256 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 AL590396.2-201ENST00000636511 1041 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.19□□□□□ -2.06
HIST1H3AP68431 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H3AP68431 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
HIST1H3AP68431 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 RNU6-173P-201ENST00000364215 104 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H3AP68431 DHFRP5-201ENST00000406944 564 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 TATDN1P1-201ENST00000414123 891 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 NUP35P1-201ENST00000422734 947 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC091390.3-201ENST00000426478 338 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 ARL5AP4-201ENST00000430731 512 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 MTND1P33-201ENST00000446251 917 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 RPS27P23-201ENST00000487608 251 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC096576.1-201ENST00000489014 359 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 OR5BM1P-201ENST00000512021 366 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC074050.1-201ENST00000563247 211 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 MIR4319-201ENST00000577285 85 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC022069.1-201ENST00000582910 658 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 OR2AS2P-201ENST00000606902 342 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC092608.2-201ENST00000624427 218 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
HIST1H3AP68431 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HIST1H3AP68431 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
HIST1H3AP68431 ENSAP3-201ENST00000312710 333 ntBASIC2.17□□□□□ -2.06
HIST1H3AP68431 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HIST1H3AP68431 RNU6-730P-201ENST00000383954 104 ntBASIC2.17□□□□□ -2.06
HIST1H3AP68431 MIR518C-201ENST00000384822 101 ntBASIC2.17□□□□□ -2.06
HIST1H3AP68431 ANAPC10P1-201ENST00000395991 556 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms