Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 RPS3AP46-201ENST00000448352 682 ntBASIC3.1□□□□□ -1.91
LMO4P61968 RPL26P28-201ENST00000451325 435 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC104073.1-201ENST00000451988 151 ntBASIC3.1□□□□□ -1.91
LMO4P61968 USP9YP34-201ENST00000453983 808 ntBASIC3.1□□□□□ -1.91
LMO4P61968 SNRPGP5-201ENST00000456003 220 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AP000873.1-201ENST00000463987 400 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.1□□□□□ -1.91
LMO4P61968 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 AC022483.1-201ENST00000514020 567 ntBASIC3.1□□□□□ -1.91
LMO4P61968 RNU6-528P-201ENST00000516926 100 ntBASIC3.1□□□□□ -1.91
LMO4P61968 IGKV2D-36-201ENST00000518643 226 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 AC027309.2-201ENST00000520566 192 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AP000790.1-201ENST00000528891 737 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AP003385.6-201ENST00000531603 374 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AC069240.1-201ENST00000548774 375 ntBASIC3.1□□□□□ -1.91
LMO4P61968 ADI1P3-201ENST00000549509 470 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
LMO4P61968 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 CYCSP2-201ENST00000558168 301 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC090877.1-201ENST00000561418 344 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC107954.1-201ENST00000565906 727 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 AC090616.5-202ENST00000582111 297 ntBASIC3.1□□□□□ -1.91
LMO4P61968 MIR4719-201ENST00000585233 84 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 AL137849.1-201ENST00000604767 169 ntBASIC3.1□□□□□ -1.91
LMO4P61968 IGHV3-29-201ENST00000604817 344 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC025253.1-201ENST00000613623 543 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC092794.2-201ENST00000620933 563 ntBASIC3.1□□□□□ -1.91
LMO4P61968 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
LMO4P61968 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LMO4P61968 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO4P61968 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LMO4P61968 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LMO4P61968 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LMO4P61968 Y_RNA.97-201ENST00000363094 102 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNU6-251P-201ENST00000363235 104 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNU6-216P-201ENST00000363282 104 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNA5SP387-201ENST00000364226 106 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNU4-12P-201ENST00000365233 139 ntBASIC3.09□□□□□ -1.91
LMO4P61968 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
LMO4P61968 RNU6-1122P-201ENST00000384449 107 ntBASIC3.09□□□□□ -1.91
LMO4P61968 SNORA40.3-201ENST00000390964 122 ntBASIC3.09□□□□□ -1.91
LMO4P61968 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LMO4P61968 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
LMO4P61968 HMGB1P11-201ENST00000413899 637 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO4P61968 AIMP1P1-201ENST00000418670 937 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RPS27AP14-201ENST00000422868 454 ntBASIC3.09□□□□□ -1.91
LMO4P61968 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.09□□□□□ -1.91
LMO4P61968 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO4P61968 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
LMO4P61968 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 HMGN2P21-201ENST00000447764 270 ntBASIC3.09□□□□□ -1.91
LMO4P61968 MTCO1P48-201ENST00000448024 1096 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
LMO4P61968 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
LMO4P61968 FAM92A1P2-202ENST00000504766 877 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 AC110768.1-201ENST00000509222 400 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC091133.4-201ENST00000511142 308 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC074344.1-201ENST00000512823 224 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNA5SP208-201ENST00000516156 78 ntBASIC3.09□□□□□ -1.91
LMO4P61968 DEFB131D-201ENST00000526803 184 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LMO4P61968 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO4P61968 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO4P61968 SULT1C2P1-202ENST00000562418 459 ntBASIC3.09□□□□□ -1.91
LMO4P61968 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO4P61968 MIR3913-1-201ENST00000577744 102 ntBASIC3.09□□□□□ -1.91
LMO4P61968 MIR3922-201ENST00000585192 84 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.09□□□□□ -1.91
LMO4P61968 AP000860.1-201ENST00000605250 559 ntBASIC3.09□□□□□ -1.91
LMO4P61968 RNU6-88P-201ENST00000606801 100 ntBASIC3.09□□□□□ -1.91
LMO4P61968 U3.45-201ENST00000607547 219 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC131902.3-201ENST00000611767 581 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms