Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDL3P58872 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.46□□□□□ -1.7
RHBDL3P58872 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDL3P58872 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RHBDL3P58872 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RHBDL3P58872 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 RNU5A-1-201ENST00000362698 116 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RNU6-501P-201ENST00000364072 100 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RNU6-660P-201ENST00000364566 109 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RHBDL3P58872 RNU6-432P-201ENST00000384196 109 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 MIR23A-201ENST00000385245 73 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 MIR513A2-201ENST00000385249 127 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RNU4-72P-201ENST00000410754 173 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RPS29P4-201ENST00000414733 161 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 PPP1R11P2-201ENST00000423543 382 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AP000907.1-201ENST00000428428 510 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AL590383.1-201ENST00000428602 75 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 UBE2D3P1-201ENST00000436669 444 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDL3P58872 PRDX3P3-201ENST00000447765 522 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDL3P58872 ART2BP-201ENST00000453501 499 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDL3P58872 CBX3P3-201ENST00000508108 532 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDL3P58872 AC026726.1-201ENST00000512859 601 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RN7SKP18-201ENST00000516005 275 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 DUXAP2-201ENST00000519198 589 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 FAM60DP-201ENST00000524174 632 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AC125611.2-201ENST00000551907 647 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDL3P58872 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDL3P58872 AC106900.2-201ENST00000604994 317 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AC004908.2-201ENST00000609090 574 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AC128687.2-201ENST00000609657 566 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RHBDL3P58872 AL357559.1-201ENST00000622228 274 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AP000676.3-201ENST00000623299 569 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RHBDL3P58872 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 CR383658.2-201ENST00000547576 1525 ntBASIC4.45□□□□□ -1.7
RHBDL3P58872 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDL3P58872 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RHBDL3P58872 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RHBDL3P58872 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC008568.2-201ENST00000623862 2313 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC004552.1-201ENST00000419089 348 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC233728.2-201ENST00000425348 757 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDL3P58872 RPL37P21-201ENST00000435890 276 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 HMGN2P20-201ENST00000437531 273 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 RPL26P6-201ENST00000440913 438 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 RPL7P36-201ENST00000444633 681 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDL3P58872 RPS3AP46-201ENST00000448352 682 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AL133217.1-201ENST00000450980 425 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 RPL7P49-201ENST00000471402 708 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 RN7SL293P-201ENST00000481765 281 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC090543.2-201ENST00000483963 348 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC005178.1-201ENST00000508392 440 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC110768.1-201ENST00000509222 400 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.44□□□□□ -1.7
RHBDL3P58872 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC006960.3-201ENST00000561845 705 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 TPMTP1-201ENST00000592307 737 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 MTCYBP22-201ENST00000603788 447 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 BCRP9-201ENST00000605312 388 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC091965.4-201ENST00000607691 587 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC120349.3-201ENST00000624377 529 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 IPO8P1-201ENST00000455509 3109 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 AC007256.1-201ENST00000392253 2765 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDL3P58872 AC092125.1-201ENST00000562568 1995 ntBASIC4.44□□□□□ -1.7
RHBDL3P58872 ZNF807-201ENST00000328088 1707 ntBASIC4.43□□□□□ -1.7
RHBDL3P58872 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RHBDL3P58872 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RHBDL3P58872 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms