Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 SNORA75-201ENST00000384158 137 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 RNU6-1119P-201ENST00000384349 108 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN20P56880 RPS20P2-201ENST00000402520 389 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AL663109.1-201ENST00000411498 844 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN20P56880 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN20P56880 RPL21P109-201ENST00000422213 475 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 RPL22P17-201ENST00000438729 315 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 HMGB1P37-201ENST00000439613 609 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 MTND1P9-201ENST00000453775 944 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 SNRPGP5-201ENST00000456003 220 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 SNORD42A-201ENST00000459584 64 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 RN7SL323P-201ENST00000494712 295 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC017037.2-201ENST00000513850 890 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 MTND4LP31-201ENST00000514859 294 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 AP002453.2-201ENST00000533503 320 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 CR383656.7-201ENST00000548164 174 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 HSPE1P5-201ENST00000561489 272 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 AC012213.3-201ENST00000577199 777 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN20P56880 AL359999.1-201ENST00000604513 294 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AL031176.1-201ENST00000604554 466 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN20P56880 AL161637.1-201ENST00000622380 412 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 AL354798.1-201ENST00000622505 329 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN20P56880 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLDN20P56880 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 TEX21P-201ENST00000447107 1476 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 MTND5P33-201ENST00000571250 1450 ntBASIC3.52□□□□□ -1.85
CLDN20P56880 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN20P56880 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN20P56880 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLDN20P56880 Y_RNA.46-201ENST00000362695 102 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN20P56880 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 OR5H15-201ENST00000383696 930 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 SNORA40.3-201ENST00000390964 122 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 DEFB108C-201ENST00000400154 252 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 RPL7P25-201ENST00000404151 721 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AL138880.1-201ENST00000405824 642 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 USP9YP13-201ENST00000417797 480 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 DLGAP5P1-201ENST00000430307 464 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN20P56880 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC122718.1-201ENST00000439448 744 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC092641.1-201ENST00000440229 772 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 MTND1P27-201ENST00000451117 902 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AL033528.1-201ENST00000453780 140 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 FAM133DP-201ENST00000464802 691 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN20P56880 AL139099.1-201ENST00000497398 403 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC068305.1-201ENST00000497406 726 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 RNU6-1095P-201ENST00000516148 108 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 RNU6-201P-201ENST00000517100 61 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms