Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 HMGB1P36-201ENST00000487709 576 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.95□□□□□ -1.78
HDAC4P56524 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.95□□□□□ -1.78
HDAC4P56524 AC010424.1-201ENST00000506336 297 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.95□□□□□ -1.78
HDAC4P56524 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
HDAC4P56524 Y_RNA.695-201ENST00000516715 107 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.95□□□□□ -1.78
HDAC4P56524 SUMO2P20-201ENST00000520803 283 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC024224.1-201ENST00000538284 609 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 CYCSP30-201ENST00000546447 172 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.95□□□□□ -1.78
HDAC4P56524 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.95□□□□□ -1.78
HDAC4P56524 AC087499.8-201ENST00000578406 226 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AP000403.1-201ENST00000603349 851 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC097468.3-201ENST00000607956 456 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC239868.4-201ENST00000608318 671 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 XIST_intron.1-201ENST00000619444 68 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDAC4P56524 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDAC4P56524 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDAC4P56524 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
HDAC4P56524 ZNF826P-207ENST00000622273 1910 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
HDAC4P56524 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HDAC4P56524 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 MIR208A-201ENST00000362287 71 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 RNU6-28P-201ENST00000362378 107 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 RNA5SP258-201ENST00000362750 119 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDAC4P56524 HMGN2P8-201ENST00000391458 268 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 MIR320C1-201ENST00000408566 88 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 RNU6ATAC-201ENST00000408749 126 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 HMGB1P11-201ENST00000413899 637 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC006366.1-201ENST00000422002 759 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 DLGAP5P1-201ENST00000430307 464 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
HDAC4P56524 MTCO2P7-201ENST00000446518 666 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 UBDP1-202ENST00000457888 382 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 RPL31P13-201ENST00000484151 370 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC106872.3-201ENST00000495104 446 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 UBE2CP3-201ENST00000502715 450 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC091965.2-201ENST00000512324 613 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC093853.1-201ENST00000515689 483 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HDAC4P56524 AC023161.2-201ENST00000551218 780 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.94□□□□□ -1.78
HDAC4P56524 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 BCRP9-201ENST00000605312 388 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AL390208.1-201ENST00000605885 644 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC103710.4-201ENST00000609301 899 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC092140.2-201ENST00000618027 521 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC009509.4-201ENST00000619202 509 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC040168.1-201ENST00000623594 991 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AC091905.1-201ENST00000624400 311 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.94□□□□□ -1.78
HDAC4P56524 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.94□□□□□ -1.78
HDAC4P56524 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
HDAC4P56524 AF127577.6-201ENST00000623352 2191 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.93□□□□□ -1.78
HDAC4P56524 AC138915.3-201ENST00000562908 1389 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNU5F-6P-201ENST00000362979 116 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNU6-1249P-201ENST00000363237 111 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNU6-501P-201ENST00000364072 100 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNU4-75P-201ENST00000364621 146 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 Y_RNA.553-201ENST00000384670 102 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC4P56524 RN7SKP266-201ENST00000410232 287 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RN7SKP142-201ENST00000411236 328 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 CYCSP19-201ENST00000411715 316 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AC127526.1-201ENST00000417526 366 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.93□□□□□ -1.78
HDAC4P56524 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RSU1P2-202ENST00000437884 485 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 SDCBPP1-201ENST00000440192 890 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HDAC4P56524 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 COX6CP12-201ENST00000446748 202 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 DNAJC19P1-201ENST00000455312 319 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms