Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
GFRA1P56159 TDGF1P1-201ENST00000445734 527 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 RN7SL244P-201ENST00000493405 297 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.58□□□□□ -1.68
GFRA1P56159 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 RNA5SP43-201ENST00000516559 110 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RN7SKP60-201ENST00000516985 239 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 Y_RNA.718-201ENST00000517110 102 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RN7SKP258-201ENST00000517151 304 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 ERHP1-201ENST00000523006 310 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AC008489.1-201ENST00000524271 483 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AL359219.2-201ENST00000555184 348 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC009852.2-201ENST00000567898 485 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 AC022884.2-201ENST00000578535 580 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GFRA1P56159 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 EIF3FP1-201ENST00000613970 806 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 MTND4LP32-201ENST00000636111 270 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.58□□□□□ -1.68
GFRA1P56159 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 DDX18P3-201ENST00000404856 2007 ntBASIC4.58□□□□□ -1.68
GFRA1P56159 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.58□□□□□ -1.68
GFRA1P56159 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GFRA1P56159 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
GFRA1P56159 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.57□□□□□ -1.68
GFRA1P56159 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 AL365440.1-201ENST00000436135 2167 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 RNA5SP123-201ENST00000363244 119 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 RNA5SP428-201ENST00000365129 132 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 RNU6-393P-201ENST00000384475 107 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 RNY4P36-201ENST00000391116 96 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 CISD1P1-201ENST00000393907 327 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 MIR548P-201ENST00000408336 84 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC016769.2-201ENST00000414815 475 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC079809.1-201ENST00000415468 276 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 AL591704.1-201ENST00000432574 275 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 DYNLL1P5-201ENST00000467158 270 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC096576.1-201ENST00000489014 359 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 VN1R104P-201ENST00000505115 1009 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.57□□□□□ -1.68
GFRA1P56159 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA1P56159 RNA5SP454-201ENST00000517231 127 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.57□□□□□ -1.68
GFRA1P56159 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 HMGB3P26-201ENST00000560051 582 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.57□□□□□ -1.68
GFRA1P56159 HMGN2P28-201ENST00000606102 262 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.57□□□□□ -1.68
GFRA1P56159 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AL353748.2-201ENST00000622148 471 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 AC091905.4-201ENST00000623432 202 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 OR52H1-202ENST00000641796 1061 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 INTS6P1-201ENST00000504674 2530 ntBASIC4.57□□□□□ -1.68
GFRA1P56159 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA1P56159 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA1P56159 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 AL356489.2-201ENST00000566968 3528 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA1P56159 RNU6-254P-201ENST00000363377 107 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 Y_RNA.128-201ENST00000363391 112 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 Y_RNA.399-201ENST00000383955 105 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RNU6-434P-201ENST00000384376 107 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 SNORD116-29-201ENST00000384516 83 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 MIR550A3-201ENST00000390735 95 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RNU6-817P-201ENST00000391083 104 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AL133270.1-201ENST00000402635 279 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 SNORA77-201ENST00000408716 125 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RN7SKP158-201ENST00000410453 326 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RNA5SP296-201ENST00000410523 111 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AL590762.4-201ENST00000425885 253 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 COX6CP13-201ENST00000428703 226 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms