Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 COX7A2P2-201ENST00000505291 250 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC116353.3-201ENST00000511215 249 ntBASIC2.93□□□□□ -1.94
LIM2P55344 MTCO2P32-201ENST00000514865 403 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC022861.1-201ENST00000522981 663 ntBASIC2.93□□□□□ -1.94
LIM2P55344 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.93□□□□□ -1.94
LIM2P55344 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.93□□□□□ -1.94
LIM2P55344 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.93□□□□□ -1.94
LIM2P55344 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.93□□□□□ -1.94
LIM2P55344 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.93□□□□□ -1.94
LIM2P55344 MTND4P33-201ENST00000556706 766 ntBASIC2.93□□□□□ -1.94
LIM2P55344 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 AC087481.2-201ENST00000565492 330 ntBASIC2.93□□□□□ -1.94
LIM2P55344 MAGOH2P-202ENST00000584384 429 ntBASIC2.93□□□□□ -1.94
LIM2P55344 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.93□□□□□ -1.94
LIM2P55344 VN1R78P-201ENST00000597393 564 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.93□□□□□ -1.94
LIM2P55344 AL590240.3-201ENST00000621416 943 ntBASIC2.93□□□□□ -1.94
LIM2P55344 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.93□□□□□ -1.94
LIM2P55344 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 OR5BR1P-201ENST00000524992 1330 ntBASIC2.93□□□□□ -1.94
LIM2P55344 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.92□□□□□ -1.94
LIM2P55344 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 RNU6-1155P-201ENST00000363554 107 ntBASIC2.92□□□□□ -1.94
LIM2P55344 SNORA70.4-201ENST00000365509 134 ntBASIC2.92□□□□□ -1.94
LIM2P55344 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AP000567.1-201ENST00000406413 156 ntBASIC2.92□□□□□ -1.94
LIM2P55344 MIR1284-201ENST00000408337 120 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC245054.2-201ENST00000415639 319 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 AL137014.1-201ENST00000420490 1226 ntBASIC2.92□□□□□ -1.94
LIM2P55344 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 MTND2P9-201ENST00000422293 931 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AL590233.1-201ENST00000430017 456 ntBASIC2.92□□□□□ -1.94
LIM2P55344 ATP5F1P1-201ENST00000433775 569 ntBASIC2.92□□□□□ -1.94
LIM2P55344 MUPP-201ENST00000438111 566 ntBASIC2.92□□□□□ -1.94
LIM2P55344 CR769776.1-201ENST00000441254 787 ntBASIC2.92□□□□□ -1.94
LIM2P55344 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 RPL7P52-201ENST00000449200 742 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.92□□□□□ -1.94
LIM2P55344 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 Z82190.1-201ENST00000454534 490 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AP001992.1-205ENST00000462248 379 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC078785.3-201ENST00000476607 425 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
LIM2P55344 HMGB3P15-201ENST00000507326 574 ntBASIC2.92□□□□□ -1.94
LIM2P55344 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 XKRY-201ENST00000510392 1100 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.92□□□□□ -1.94
LIM2P55344 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 DEFB131D-201ENST00000526803 184 ntBASIC2.92□□□□□ -1.94
LIM2P55344 MTCO2P15-201ENST00000532655 656 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 AL512347.1-201ENST00000566420 503 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.92□□□□□ -1.94
LIM2P55344 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
LIM2P55344 AL050303.3-201ENST00000613704 284 ntBASIC2.92□□□□□ -1.94
LIM2P55344 AC006213.4-201ENST00000616184 634 ntBASIC2.92□□□□□ -1.94
LIM2P55344 MIR3651-201ENST00000630427 90 ntBASIC2.92□□□□□ -1.94
LIM2P55344 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
LIM2P55344 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.92□□□□□ -1.94
LIM2P55344 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
LIM2P55344 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LIM2P55344 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIM2P55344 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 MTND4P34-201ENST00000572715 1371 ntBASIC2.91□□□□□ -1.94
LIM2P55344 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LIM2P55344 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIM2P55344 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LIM2P55344 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LIM2P55344 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIM2P55344 RNA5SP374-201ENST00000362939 125 ntBASIC2.91□□□□□ -1.94
LIM2P55344 RPL7P25-201ENST00000404151 721 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL356131.1-201ENST00000405826 414 ntBASIC2.91□□□□□ -1.94
LIM2P55344 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
LIM2P55344 TPMTP2-201ENST00000414372 726 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.91□□□□□ -1.94
LIM2P55344 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 AL139421.1-201ENST00000423010 169 ntBASIC2.91□□□□□ -1.94
LIM2P55344 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LIM2P55344 AC007742.1-201ENST00000425789 329 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.91□□□□□ -1.94
LIM2P55344 AL512649.1-201ENST00000428997 581 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC006946.1-201ENST00000429106 328 ntBASIC2.91□□□□□ -1.94
LIM2P55344 RPL23AP69-201ENST00000431134 458 ntBASIC2.91□□□□□ -1.94
LIM2P55344 ELOCP26-201ENST00000436067 329 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIM2P55344 AL121871.1-201ENST00000443413 436 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms