Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AP002404.1-201ENST00000532005 451 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.33□□□□□ -1.88
ATXN3P54252 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.33□□□□□ -1.88
ATXN3P54252 AC096947.1-201ENST00000603233 470 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 OR2AS2P-201ENST00000606902 342 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC243773.3-201ENST00000613270 256 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC025588.4-201ENST00000615802 908 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC084824.4-201ENST00000620106 731 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC104985.3-201ENST00000623479 597 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.33□□□□□ -1.88
ATXN3P54252 AC106858.1-201ENST00000637497 429 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC013437.2-201ENST00000639587 677 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 AC103988.1-201ENST00000566382 2177 ntBASIC3.33□□□□□ -1.88
ATXN3P54252 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN3P54252 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.33□□□□□ -1.88
ATXN3P54252 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN3P54252 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN3P54252 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN3P54252 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN3P54252 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATXN3P54252 SSXP9-201ENST00000417503 292 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AC007742.1-201ENST00000425789 329 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 ELOCP26-201ENST00000436067 329 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN3P54252 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 RPL7P38-201ENST00000488396 739 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.32□□□□□ -1.88
ATXN3P54252 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 SNORA70.19-201ENST00000516717 90 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC006518.1-201ENST00000541449 943 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC015688.2-201ENST00000584523 262 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 AL022067.1-201ENST00000602426 454 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 AC069304.2-201ENST00000605154 435 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC007998.5-201ENST00000622938 237 ntBASIC3.32□□□□□ -1.88
ATXN3P54252 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ATXN3P54252 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN3P54252 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.32□□□□□ -1.88
ATXN3P54252 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN3P54252 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.31□□□□□ -1.88
ATXN3P54252 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN3P54252 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN3P54252 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN3P54252 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATXN3P54252 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATXN3P54252 UBE2V1P2-201ENST00000397758 440 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RSL24D1P1-201ENST00000404972 493 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RNU2-43P-201ENST00000410306 190 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RNA5SP38-201ENST00000410750 119 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AL356968.1-201ENST00000416622 474 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
ATXN3P54252 AL353691.1-201ENST00000451332 387 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC104164.3-201ENST00000467363 1258 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC108860.1-201ENST00000484521 383 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 TMEM251P1-201ENST00000503717 318 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC021678.1-201ENST00000505195 936 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.31□□□□□ -1.88
ATXN3P54252 RNU6-276P-201ENST00000516114 96 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RN7SKP31-201ENST00000516354 278 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 SNORA70.16-201ENST00000516390 95 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AP001207.2-201ENST00000519490 539 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC103783.1-201ENST00000520506 373 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN3P54252 OR10V3P-201ENST00000525712 725 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 DEFB108D-201ENST00000527787 222 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.31□□□□□ -1.88
ATXN3P54252 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms