Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPL23AP20-201ENST00000447965 421 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 RNU2-58P-201ENST00000516403 183 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 RN7SL793P-201ENST00000583259 296 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 AC098848.2-201ENST00000588023 330 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BRCA2P51587 OR4G1P-203ENST00000641984 1631 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 MIR1323-201ENST00000408090 73 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 HMGB1P12-201ENST00000438594 598 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 AC011712.1-201ENST00000588959 234 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 BX649567.1-201ENST00000642071 1134 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
BRCA2P51587 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
BRCA2P51587 AC244033.1-201ENST00000426826 870 ntBASIC1.87□□□□□ -2.11
BRCA2P51587 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.87□□□□□ -2.11
BRCA2P51587 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.86□□□□□ -2.11
BRCA2P51587 RNA5SP27-201ENST00000363839 119 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 RNU6-1032P-201ENST00000384100 107 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 RNY1P4-201ENST00000384595 115 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 DNAJC19P6-201ENST00000401853 280 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.86□□□□□ -2.11
BRCA2P51587 Y_RNA.681-201ENST00000516445 113 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 RNU6-1223P-201ENST00000517124 104 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 7SK.7-201ENST00000603504 247 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 AC098679.5-201ENST00000624394 571 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 RNU6-60P-201ENST00000364792 103 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 HAR1A.1-201ENST00000459583 118 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 AC015720.1-201ENST00000565251 277 ntBASIC1.86□□□□□ -2.11
BRCA2P51587 MIR6073-201ENST00000352083 89 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AIG1P1-201ENST00000503376 148 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AL137100.2-201ENST00000555786 315 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AL031274.2-201ENST00000599419 203 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 MTND5P27-201ENST00000428871 1720 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 RNA5SP160-201ENST00000364866 120 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 Z98749.2-208ENST00000381646 500 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 DEFB109C-201ENST00000382575 264 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 DEFB109B-201ENST00000382656 264 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.85□□□□□ -2.11
BRCA2P51587 GSTA11P-201ENST00000452866 669 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AC079804.2-201ENST00000490376 200 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AL121821.2-201ENST00000556081 394 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 RPS3AP23-202ENST00000574601 686 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BRCA2P51587 AL133412.1-201ENST00000380194 2992 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AF131216.2-201ENST00000512316 564 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 MTATP6P3-201ENST00000581686 676 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 AC080078.3-201ENST00000605407 463 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 LRRC77P-213ENST00000637727 880 ntBASIC1.85□□□□□ -2.11
BRCA2P51587 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
BRCA2P51587 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
BRCA2P51587 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
BRCA2P51587 SNORA31-201ENST00000362607 130 ntBASIC1.84□□□□□ -2.11
BRCA2P51587 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.84□□□□□ -2.11
BRCA2P51587 AC124283.4-201ENST00000581815 456 ntBASIC1.84□□□□□ -2.11
BRCA2P51587 AC006023.2-201ENST00000609916 167 ntBASIC1.84□□□□□ -2.11
BRCA2P51587 VN1R74P-201ENST00000613259 503 ntBASIC1.84□□□□□ -2.11
BRCA2P51587 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
BRCA2P51587 AC093775.1-201ENST00000624154 1868 ntBASIC1.84□□□□□ -2.11
BRCA2P51587 Y_RNA.433-201ENST00000384089 102 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.84□□□□□ -2.12
BRCA2P51587 AC009969.1-201ENST00000438726 172 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AL590664.1-201ENST00000448065 339 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 MTND1P18-201ENST00000448191 573 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 RPS29P29-201ENST00000456396 171 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC034222.1-201ENST00000494052 532 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.84□□□□□ -2.12
BRCA2P51587 GLYCAM1-201ENST00000546596 285 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC104581.2-201ENST00000572227 430 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 NF1P5-201ENST00000588287 448 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.84□□□□□ -2.12
BRCA2P51587 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
BRCA2P51587 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
BRCA2P51587 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
BRCA2P51587 RNU6-1105P-201ENST00000384774 107 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.12
BRCA2P51587 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.84□□□□□ -2.12
BRCA2P51587 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.12
BRCA2P51587 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
BRCA2P51587 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.83□□□□□ -2.12
BRCA2P51587 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
BRCA2P51587 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
BRCA2P51587 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
BRCA2P51587 RPL23AP48-201ENST00000406913 488 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 MTCO3P30-201ENST00000426425 670 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 RPL23AP7-203ENST00000449021 469 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.83□□□□□ -2.12
BRCA2P51587 AC103810.1-201ENST00000579873 453 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
BRCA2P51587 AL021368.2-201ENST00000606125 5352 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.83□□□□□ -2.12
BRCA2P51587 DHFRP5-201ENST00000406944 564 ntBASIC1.83□□□□□ -2.12
BRCA2P51587 AL136133.1-201ENST00000413694 376 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms