Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL592437.1-201ENST00000443781 492 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 RN7SL442P-201ENST00000473804 320 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.64□□□□□ -1.99
CXCL12P48061 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 AC104057.1-201ENST00000515547 497 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 MTND2P7-201ENST00000521337 640 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC068339.2-201ENST00000534395 618 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 OR8K4P-201ENST00000534608 872 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC008507.2-201ENST00000588402 1176 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC068620.3-201ENST00000602749 560 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC007938.3-201ENST00000604965 623 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC099785.1-201ENST00000605697 437 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC006023.2-201ENST00000609916 167 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AL450472.3-201ENST00000615578 367 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 VN1R7P-201ENST00000619242 903 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL12P48061 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 AP006437.1-201ENST00000641440 3685 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL12P48061 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL12P48061 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 PABPC1P7-201ENST00000413177 1513 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC111188.2-201ENST00000529697 1387 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 RNU6-374P-201ENST00000364146 108 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 RNU6-921P-201ENST00000384361 107 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 SSXP10-201ENST00000402595 565 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 NDUFB4P5-201ENST00000415445 361 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 EI24P1-201ENST00000416584 867 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC027644.1-201ENST00000419595 298 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL12P48061 MTCYBP15-201ENST00000433123 1127 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC009969.1-201ENST00000438726 172 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 AC093392.2-201ENST00000450682 337 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC104308.1-201ENST00000454621 333 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 VN1R17P-201ENST00000472048 1090 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 RPS26P21-201ENST00000475397 348 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC108860.1-201ENST00000484521 383 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 HMGB1P38-201ENST00000490557 577 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 RNF138P1-201ENST00000502765 546 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC048346.1-201ENST00000510247 144 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 IGKV3-31-201ENST00000523109 329 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL12P48061 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL12P48061 AC087894.1-201ENST00000538359 518 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC092470.1-201ENST00000546187 132 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC009063.1-201ENST00000563342 702 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC104072.1-201ENST00000568817 668 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC074051.3-201ENST00000570238 358 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 MIR4648-201ENST00000580107 72 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC090330.1-201ENST00000588646 764 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 AC107294.3-201ENST00000609211 526 ntBASIC2.63□□□□□ -1.99
CXCL12P48061 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL12P48061 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.63□□□□□ -1.99
CXCL12P48061 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL12P48061 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL12P48061 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
CXCL12P48061 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 RNU6-805P-201ENST00000365643 106 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 AL354719.1-201ENST00000406535 843 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AC096632.1-201ENST00000427395 310 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 OR2AS1P-201ENST00000427827 319 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 AL353705.4-201ENST00000449661 238 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 HMGN3P1-201ENST00000453847 193 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 HMGN2P16-201ENST00000456802 261 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 RPS20P22-201ENST00000473700 357 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 NCOR1P1-202ENST00000486162 291 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 RN7SKP24-201ENST00000515888 284 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 RNU6-885P-201ENST00000516607 104 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AP000790.1-201ENST00000528891 737 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms