Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTCO3P27-201ENST00000514397 196 ntBASIC3.13□□□□□ -1.91
SSR1P43307 SNORA31.8-201ENST00000516327 108 ntBASIC3.13□□□□□ -1.91
SSR1P43307 RNU1-104P-201ENST00000517280 175 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC023632.1-201ENST00000518463 375 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AP001804.3-201ENST00000525146 880 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.13□□□□□ -1.91
SSR1P43307 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 DPRXP5-201ENST00000604662 539 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC106900.2-201ENST00000604994 317 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AL162274.2-201ENST00000614406 332 ntBASIC3.13□□□□□ -1.91
SSR1P43307 MIR6075-201ENST00000620782 95 ntBASIC3.13□□□□□ -1.91
SSR1P43307 AC009039.2-201ENST00000624524 529 ntBASIC3.13□□□□□ -1.91
SSR1P43307 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.13□□□□□ -1.91
SSR1P43307 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSR1P43307 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
SSR1P43307 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSR1P43307 RNU6-251P-201ENST00000363235 104 ntBASIC3.12□□□□□ -1.91
SSR1P43307 SNORA71.1-201ENST00000364523 117 ntBASIC3.12□□□□□ -1.91
SSR1P43307 SNORA51.6-201ENST00000384151 125 ntBASIC3.12□□□□□ -1.91
SSR1P43307 MIR23B-201ENST00000384832 97 ntBASIC3.12□□□□□ -1.91
SSR1P43307 RPS4XP7-201ENST00000406274 780 ntBASIC3.12□□□□□ -1.91
SSR1P43307 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.12□□□□□ -1.91
SSR1P43307 DUTP6-201ENST00000425573 462 ntBASIC3.12□□□□□ -1.91
SSR1P43307 Z93242.1-201ENST00000427102 353 ntBASIC3.12□□□□□ -1.91
SSR1P43307 MTCYBP15-201ENST00000433123 1127 ntBASIC3.12□□□□□ -1.91
SSR1P43307 RPL36AP6-201ENST00000435770 321 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.12□□□□□ -1.91
SSR1P43307 HMGN1P5-201ENST00000448591 263 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.12□□□□□ -1.91
SSR1P43307 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
SSR1P43307 VPS26AP1-201ENST00000483197 979 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.12□□□□□ -1.91
SSR1P43307 snoZ278.1-201ENST00000517059 112 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSR1P43307 AL136520.1-202ENST00000555494 763 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC093519.1-201ENST00000566109 298 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.12□□□□□ -1.91
SSR1P43307 SRGNP1-201ENST00000603392 451 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AL159169.3-201ENST00000608871 561 ntBASIC3.12□□□□□ -1.91
SSR1P43307 AC110079.1-202ENST00000635213 138 ntBASIC3.12□□□□□ -1.91
SSR1P43307 OR8B1P-202ENST00000641132 1178 ntBASIC3.12□□□□□ -1.91
SSR1P43307 NUP58P1-201ENST00000502546 1738 ntBASIC3.12□□□□□ -1.91
SSR1P43307 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSR1P43307 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.12□□□□□ -1.91
SSR1P43307 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSR1P43307 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SSR1P43307 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSR1P43307 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSR1P43307 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSR1P43307 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
SSR1P43307 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSR1P43307 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
SSR1P43307 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.11□□□□□ -1.91
SSR1P43307 BTF3P8-201ENST00000414577 526 ntBASIC3.11□□□□□ -1.91
SSR1P43307 MTCO3P1-205ENST00000422088 832 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC129850.1-201ENST00000436203 508 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
SSR1P43307 AL645638.1-201ENST00000440519 361 ntBASIC3.11□□□□□ -1.91
SSR1P43307 SEPT14P24-201ENST00000447236 180 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AL358232.1-201ENST00000448030 501 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC244505.3-201ENST00000454598 187 ntBASIC3.11□□□□□ -1.91
SSR1P43307 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.11□□□□□ -1.91
SSR1P43307 BX510359.1-201ENST00000456973 237 ntBASIC3.11□□□□□ -1.91
SSR1P43307 RPS3AP43-201ENST00000479743 781 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC006445.1-201ENST00000491925 405 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.11□□□□□ -1.91
SSR1P43307 RNU5A-7P-201ENST00000515979 116 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.11□□□□□ -1.91
SSR1P43307 AP003355.1-201ENST00000518956 587 ntBASIC3.11□□□□□ -1.91
SSR1P43307 FAM60DP-201ENST00000524174 632 ntBASIC3.11□□□□□ -1.91
SSR1P43307 MIR4444-1-201ENST00000581696 74 ntBASIC3.11□□□□□ -1.91
SSR1P43307 MIR4444-2-201ENST00000584390 74 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.11□□□□□ -1.91
SSR1P43307 AC083760.1-201ENST00000589621 670 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
SSR1P43307 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.11□□□□□ -1.91
SSR1P43307 AL353748.2-201ENST00000622148 471 ntBASIC3.11□□□□□ -1.91
SSR1P43307 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.11□□□□□ -1.91
SSR1P43307 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.11□□□□□ -1.91
SSR1P43307 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SSR1P43307 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
SSR1P43307 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.11□□□□□ -1.91
SSR1P43307 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.1□□□□□ -1.91
SSR1P43307 SNORA63.3-201ENST00000362682 132 ntBASIC3.1□□□□□ -1.91
SSR1P43307 SNORA67.1-201ENST00000364749 141 ntBASIC3.1□□□□□ -1.91
SSR1P43307 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.1□□□□□ -1.91
SSR1P43307 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.1□□□□□ -1.91
SSR1P43307 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AL162389.1-201ENST00000449233 177 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AC104978.1-201ENST00000449387 391 ntBASIC3.1□□□□□ -1.91
SSR1P43307 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSR1P43307 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.1□□□□□ -1.91
SSR1P43307 RN7SL807P-201ENST00000470923 297 ntBASIC3.1□□□□□ -1.91
SSR1P43307 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AL358832.1-201ENST00000497800 389 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms