Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNORA36C-201ENST00000384289 132 ntBASIC1.73□□□□□ -2.13
SNCAP37840 U3.26-201ENST00000391236 204 ntBASIC1.73□□□□□ -2.13
SNCAP37840 SNORA11.1-201ENST00000408133 129 ntBASIC1.73□□□□□ -2.13
SNCAP37840 Z92545.1-201ENST00000411782 234 ntBASIC1.73□□□□□ -2.13
SNCAP37840 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AL356379.1-201ENST00000414105 126 ntBASIC1.73□□□□□ -2.13
SNCAP37840 MTCO3P30-201ENST00000426425 670 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.73□□□□□ -2.13
SNCAP37840 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.73□□□□□ -2.13
SNCAP37840 AC126389.1-201ENST00000477436 290 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC090453.1-201ENST00000495560 436 ntBASIC1.73□□□□□ -2.13
SNCAP37840 MTCO2P9-201ENST00000503214 694 ntBASIC1.73□□□□□ -2.13
SNCAP37840 RNA5SP281-201ENST00000516504 135 ntBASIC1.73□□□□□ -2.13
SNCAP37840 SNORA31.20-201ENST00000517111 133 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.73□□□□□ -2.13
SNCAP37840 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.73□□□□□ -2.13
SNCAP37840 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.73□□□□□ -2.13
SNCAP37840 MIR3200-201ENST00000580767 85 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC092474.3-201ENST00000603022 568 ntBASIC1.73□□□□□ -2.13
SNCAP37840 NRBF2P5-201ENST00000603087 788 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC009314.1-201ENST00000603871 304 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC012213.4-201ENST00000606457 354 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.73□□□□□ -2.13
SNCAP37840 U73479.1-201ENST00000618062 168 ntBASIC1.73□□□□□ -2.13
SNCAP37840 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SNCAP37840 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.73□□□□□ -2.13
SNCAP37840 AC093591.3-201ENST00000634516 308 ntBASIC1.73□□□□□ -2.13
SNCAP37840 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SNCAP37840 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SNCAP37840 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNCAP37840 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 AL031679.1-201ENST00000400616 525 ntBASIC1.72□□□□□ -2.13
SNCAP37840 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNCAP37840 RNA5SP498-201ENST00000411342 120 ntBASIC1.72□□□□□ -2.13
SNCAP37840 RPL17P12-201ENST00000413391 526 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 MRPS33P4-201ENST00000434892 317 ntBASIC1.72□□□□□ -2.13
SNCAP37840 RPL23AP83-201ENST00000434984 473 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AC018634.1-201ENST00000437554 401 ntBASIC1.72□□□□□ -2.13
SNCAP37840 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.72□□□□□ -2.13
SNCAP37840 HIGD1AP2-201ENST00000446367 280 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.72□□□□□ -2.13
SNCAP37840 snoU13.22-201ENST00000459428 104 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.72□□□□□ -2.13
SNCAP37840 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.72□□□□□ -2.13
SNCAP37840 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.72□□□□□ -2.13
SNCAP37840 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.72□□□□□ -2.13
SNCAP37840 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
SNCAP37840 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.72□□□□□ -2.13
SNCAP37840 AP003717.3-201ENST00000544832 1180 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.72□□□□□ -2.13
SNCAP37840 AC027176.1-201ENST00000560204 514 ntBASIC1.72□□□□□ -2.13
SNCAP37840 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.72□□□□□ -2.13
SNCAP37840 SNORA35B-201ENST00000607417 129 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AC018755.4-201ENST00000619715 454 ntBASIC1.72□□□□□ -2.13
SNCAP37840 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.72□□□□□ -2.13
SNCAP37840 AC110079.1-202ENST00000635213 138 ntBASIC1.72□□□□□ -2.13
SNCAP37840 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNCAP37840 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
SNCAP37840 AC022336.2-201ENST00000568966 2538 ntBASIC1.71□□□□□ -2.14
SNCAP37840 AC011460.1-201ENST00000636268 1834 ntBASIC1.71□□□□□ -2.14
SNCAP37840 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNCAP37840 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNCAP37840 SNORA46.1-201ENST00000391069 153 ntBASIC1.71□□□□□ -2.14
SNCAP37840 NDUFB4P4-201ENST00000404822 243 ntBASIC1.71□□□□□ -2.14
SNCAP37840 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.71□□□□□ -2.14
SNCAP37840 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.71□□□□□ -2.14
SNCAP37840 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.71□□□□□ -2.14
SNCAP37840 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.71□□□□□ -2.14
SNCAP37840 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.71□□□□□ -2.14
SNCAP37840 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.71□□□□□ -2.14
SNCAP37840 AC233279.1-201ENST00000455300 423 ntBASIC1.71□□□□□ -2.14
SNCAP37840 FAM172BP-201ENST00000487497 1089 ntBASIC1.71□□□□□ -2.14
SNCAP37840 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.71□□□□□ -2.14
SNCAP37840 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.71□□□□□ -2.14
SNCAP37840 HMGB1P46-201ENST00000520062 610 ntBASIC1.71□□□□□ -2.14
SNCAP37840 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.71□□□□□ -2.14
SNCAP37840 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.71□□□□□ -2.14
SNCAP37840 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
SNCAP37840 AC008749.1-201ENST00000597650 306 ntBASIC1.71□□□□□ -2.14
SNCAP37840 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.71□□□□□ -2.14
SNCAP37840 AC007998.5-201ENST00000622938 237 ntBASIC1.71□□□□□ -2.14
SNCAP37840 AL049737.1-201ENST00000413920 1403 ntBASIC1.71□□□□□ -2.14
SNCAP37840 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNCAP37840 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNCAP37840 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
SNCAP37840 AC009487.4-201ENST00000624969 3585 ntBASIC1.7□□□□□ -2.14
SNCAP37840 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SNCAP37840 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SNCAP37840 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SNCAP37840 AL356057.1-202ENST00000402263 756 ntBASIC1.7□□□□□ -2.14
SNCAP37840 SNORA11.4-201ENST00000408823 129 ntBASIC1.7□□□□□ -2.14
SNCAP37840 AL030996.1-201ENST00000411430 235 ntBASIC1.7□□□□□ -2.14
SNCAP37840 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.7□□□□□ -2.14
SNCAP37840 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.7□□□□□ -2.14
SNCAP37840 GPM6BP3-201ENST00000442797 145 ntBASIC1.7□□□□□ -2.14
SNCAP37840 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms