Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC104010.1-201ENST00000616889 150 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 ZYXP1-201ENST00000617638 118 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC009878.1-201ENST00000621819 340 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC118273.1-201ENST00000525324 3006 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 FAM35DP-201ENST00000323387 2712 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ABCD3P28288 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 AC066616.2-201ENST00000559334 1481 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ABCD3P28288 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 FGF7P2-201ENST00000332473 296 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 RN7SKP227-201ENST00000364445 330 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 SNORA23-201ENST00000365128 182 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 RNY3P10-201ENST00000384764 102 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 RPL21P65-201ENST00000406094 466 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AP000567.1-201ENST00000406413 156 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 Y_RNA.598-201ENST00000410480 95 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.73□□□□□ -1.81
ABCD3P28288 RPS7P13-201ENST00000413955 498 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AL356583.2-201ENST00000426536 280 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.73□□□□□ -1.81
ABCD3P28288 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.73□□□□□ -1.81
ABCD3P28288 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
ABCD3P28288 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 HSFY6P-201ENST00000445573 403 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.73□□□□□ -1.81
ABCD3P28288 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.73□□□□□ -1.81
ABCD3P28288 FTH1P2-201ENST00000466086 412 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC068587.1-201ENST00000483613 781 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 CBX3P3-201ENST00000508108 532 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 ARL2BPP6-201ENST00000512757 439 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.73□□□□□ -1.81
ABCD3P28288 AC022616.6-201ENST00000520479 119 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 FAM60DP-201ENST00000524174 632 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.73□□□□□ -1.81
ABCD3P28288 CCNG2P1-201ENST00000549521 1000 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC104662.1-201ENST00000604448 511 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC103710.1-201ENST00000610003 901 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 MIR6868-201ENST00000611215 58 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC108479.2-201ENST00000617314 601 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 AC092140.2-201ENST00000618027 521 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 AP001486.2-201ENST00000561652 5113 ntBASIC3.73□□□□□ -1.81
ABCD3P28288 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ABCD3P28288 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ABCD3P28288 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 U3.4-201ENST00000363352 213 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 SNORD6-201ENST00000365444 73 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 SNORD116-1-201ENST00000384335 95 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RNU6-278P-201ENST00000390945 109 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 FCF1P10-201ENST00000407590 479 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 UBE2FP1-201ENST00000416536 447 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ABCD3P28288 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.72□□□□□ -1.81
ABCD3P28288 BX890604.2-201ENST00000427883 474 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.72□□□□□ -1.81
ABCD3P28288 RABEPKP1-201ENST00000440529 1026 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 TXNP1-201ENST00000441872 371 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 KATNBL1P3-201ENST00000443475 909 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RPL7P15-201ENST00000461190 712 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RPS23P3-201ENST00000470993 430 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RN7SL271P-201ENST00000487601 295 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AC025554.1-201ENST00000505641 188 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 GMPSP1-201ENST00000514075 579 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 SNORA70.16-201ENST00000516390 95 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RNU6-840P-201ENST00000517275 65 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AC060788.1-201ENST00000521318 469 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
ABCD3P28288 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
ABCD3P28288 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.72□□□□□ -1.81
ABCD3P28288 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 AC106900.2-201ENST00000604994 317 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.72□□□□□ -1.81
ABCD3P28288 AC025594.3-201ENST00000613068 790 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 AC068724.3-201ENST00000625906 87 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 RNA5SP196-201ENST00000625967 102 ntBASIC3.72□□□□□ -1.81
ABCD3P28288 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.72□□□□□ -1.81
ABCD3P28288 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.72□□□□□ -1.81
ABCD3P28288 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms