Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN3P26045 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 RN7SKP266-201ENST00000410232 287 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC007390.1-201ENST00000415722 356 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 MTCO1P39-201ENST00000426148 480 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC079780.1-201ENST00000428259 207 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 ATP5JP1-201ENST00000431631 322 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 AL133217.1-201ENST00000450980 425 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 BX322784.1-201ENST00000455793 1077 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC106707.2-201ENST00000484182 374 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 RPL7P47-201ENST00000497299 556 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC020893.1-201ENST00000502452 580 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC024589.1-201ENST00000512207 263 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 SNORA70.19-201ENST00000516717 90 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC087276.1-201ENST00000529659 480 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC090615.1-201ENST00000577519 154 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 MIR4425-201ENST00000580572 84 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN3P26045 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC072039.2-201ENST00000608883 439 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC106028.5-201ENST00000610332 395 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 CR392039.5-201ENST00000623201 510 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC012442.3-202ENST00000636742 206 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC009093.8-201ENST00000641769 292 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN3P26045 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PTPN3P26045 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
PTPN3P26045 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTPN3P26045 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN3P26045 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN3P26045 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN3P26045 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
PTPN3P26045 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 Y_RNA.302-201ENST00000364997 102 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 RNA5SP88-201ENST00000365560 109 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 RNU6-253P-201ENST00000384730 105 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 MIR134-201ENST00000385258 73 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN3P26045 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 AC011233.1-201ENST00000422812 283 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AP000907.1-201ENST00000428428 510 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC122718.1-201ENST00000439448 744 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 CDC27P1-201ENST00000445384 715 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 MTCO1P27-201ENST00000448269 226 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN3P26045 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 RPS4XP2-201ENST00000458402 793 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 FAM133DP-201ENST00000464802 691 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 RPS23P3-201ENST00000470993 430 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 RPL30P6-201ENST00000475925 342 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC104563.1-201ENST00000476147 376 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 AC112198.1-201ENST00000505369 1220 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC010486.2-201ENST00000505572 483 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 TXNP6-201ENST00000510190 310 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 LTV1P1-201ENST00000510683 1237 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN3P26045 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN3P26045 IGKV2-23-201ENST00000518729 323 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 OR6C7P-201ENST00000547875 934 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.53□□□□□ -1.84
PTPN3P26045 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC090186.1-201ENST00000605991 572 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPN3P26045 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPN3P26045 TUG1_1.1-201ENST00000610654 145 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AL110115.1-201ENST00000614396 364 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AL161637.1-201ENST00000622380 412 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 AC099063.3-201ENST00000642066 185 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPN3P26045 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
PTPN3P26045 AL513302.2-201ENST00000562313 1842 ntBASIC3.53□□□□□ -1.84
PTPN3P26045 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms