Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BTF3P10-201ENST00000433415 495 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.8□□□□□ -1.8
CAPN3P20807 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.8□□□□□ -1.8
CAPN3P20807 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.8□□□□□ -1.8
CAPN3P20807 VN1R105P-201ENST00000486595 910 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 LTV1P1-201ENST00000510683 1237 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.8□□□□□ -1.8
CAPN3P20807 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CAPN3P20807 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.8□□□□□ -1.8
CAPN3P20807 SNORA51-201ENST00000606420 132 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 AC093838.1-201ENST00000613014 469 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 AL138880.2-201ENST00000616214 239 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 AC084757.4-201ENST00000616350 526 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CAPN3P20807 AC012321.1-201ENST00000561622 1588 ntBASIC3.8□□□□□ -1.8
CAPN3P20807 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CAPN3P20807 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CAPN3P20807 AC006378.2-201ENST00000623178 2476 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 OR11H4-201ENST00000315409 1082 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.79□□□□□ -1.8
CAPN3P20807 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC245054.1-201ENST00000420944 258 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 USP9YP36-201ENST00000424581 829 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC083863.1-201ENST00000438811 231 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 HMGB1P37-201ENST00000439613 609 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 MTND5P2-201ENST00000442927 1142 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.79□□□□□ -1.8
CAPN3P20807 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CAPN3P20807 MTCO3P16-201ENST00000454456 754 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AL359385.1-201ENST00000456509 365 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AL049874.1-201ENST00000489560 388 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CAPN3P20807 AC004069.2-201ENST00000505438 1114 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 SNORA31.1-201ENST00000515993 133 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 SNORA31.5-201ENST00000516190 133 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
CAPN3P20807 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.79□□□□□ -1.8
CAPN3P20807 AL355836.1-201ENST00000555951 870 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.79□□□□□ -1.8
CAPN3P20807 ZNF415P1-201ENST00000582279 1166 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AL161756.2-201ENST00000604597 246 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC103710.4-201ENST00000609301 899 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC069200.1-201ENST00000609511 323 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC008121.2-201ENST00000614647 523 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AL603758.1-201ENST00000618654 241 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CAPN3P20807 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
CAPN3P20807 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CAPN3P20807 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CAPN3P20807 AC010733.2-201ENST00000589496 5702 ntBASIC3.79□□□□□ -1.8
CAPN3P20807 AC021755.1-201ENST00000559747 1447 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
CAPN3P20807 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CAPN3P20807 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 SNORA23-201ENST00000365128 182 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 RNU6-769P-201ENST00000384407 104 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 MIR514A1-201ENST00000385133 98 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 AC009237.8-201ENST00000445492 379 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 AL162389.1-201ENST00000449233 177 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 RPL36AP33-201ENST00000450395 310 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 ATG12P2-201ENST00000456830 416 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 RPL7P49-201ENST00000471402 708 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.78□□□□□ -1.8
CAPN3P20807 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 SNORD59.2-201ENST00000516873 68 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 AL133271.1-201ENST00000538229 291 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 ZNF321P-202ENST00000550843 495 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 AC124947.2-202ENST00000552735 133 ntBASIC3.78□□□□□ -1.8
CAPN3P20807 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.78□□□□□ -1.8
CAPN3P20807 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms