Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.37□□□□□ -1.87
VCLP18206 AC097478.2-201ENST00000610572 514 ntBASIC3.37□□□□□ -1.87
VCLP18206 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VCLP18206 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
VCLP18206 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCLP18206 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.37□□□□□ -1.87
VCLP18206 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.37□□□□□ -1.87
VCLP18206 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VCLP18206 AL022578.1-201ENST00000439330 1433 ntBASIC3.36□□□□□ -1.87
VCLP18206 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VCLP18206 FRG1BP-201ENST00000278882 761 ntBASIC3.36□□□□□ -1.87
VCLP18206 RPL7P26-201ENST00000333817 754 ntBASIC3.36□□□□□ -1.87
VCLP18206 RNU1-33P-201ENST00000364249 162 ntBASIC3.36□□□□□ -1.87
VCLP18206 MIR135A2-201ENST00000384854 100 ntBASIC3.36□□□□□ -1.87
VCLP18206 U3.19-201ENST00000390893 196 ntBASIC3.36□□□□□ -1.87
VCLP18206 RNU2-43P-201ENST00000410306 190 ntBASIC3.36□□□□□ -1.87
VCLP18206 CCDC58P2-201ENST00000417131 366 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC013410.2-201ENST00000422627 201 ntBASIC3.36□□□□□ -1.87
VCLP18206 AL139421.1-201ENST00000423010 169 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 DPPA2P1-201ENST00000428060 556 ntBASIC3.36□□□□□ -1.87
VCLP18206 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
VCLP18206 RPL17P49-201ENST00000443728 411 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC097262.1-201ENST00000452559 548 ntBASIC3.36□□□□□ -1.87
VCLP18206 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 AC234775.1-201ENST00000454247 670 ntBASIC3.36□□□□□ -1.87
VCLP18206 snoU13.8-201ENST00000458890 104 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
VCLP18206 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 RNU6-150P-201ENST00000516237 95 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 NBEAP1-201ENST00000554452 979 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.36□□□□□ -1.87
VCLP18206 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 AP005205.1-201ENST00000563503 508 ntBASIC3.36□□□□□ -1.87
VCLP18206 AL049838.1-201ENST00000563647 981 ntBASIC3.36□□□□□ -1.87
VCLP18206 MIR4474-201ENST00000579189 78 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.36□□□□□ -1.87
VCLP18206 AC245884.10-201ENST00000597355 337 ntBASIC3.36□□□□□ -1.87
VCLP18206 AL109653.1-201ENST00000603091 248 ntBASIC3.36□□□□□ -1.87
VCLP18206 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.36□□□□□ -1.87
VCLP18206 AC106900.2-201ENST00000604994 317 ntBASIC3.36□□□□□ -1.87
VCLP18206 AP002826.1-201ENST00000608835 315 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC069200.1-201ENST00000609511 323 ntBASIC3.36□□□□□ -1.87
VCLP18206 AC245297.2-201ENST00000610119 565 ntBASIC3.36□□□□□ -1.87
VCLP18206 MIR7975-201ENST00000619350 68 ntBASIC3.36□□□□□ -1.87
VCLP18206 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.36□□□□□ -1.87
VCLP18206 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VCLP18206 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
VCLP18206 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VCLP18206 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VCLP18206 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VCLP18206 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VCLP18206 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
VCLP18206 RNU6-952P-201ENST00000391164 108 ntBASIC3.35□□□□□ -1.87
VCLP18206 RPL23AP29-201ENST00000397284 453 ntBASIC3.35□□□□□ -1.87
VCLP18206 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 USP9YP33-201ENST00000412220 421 ntBASIC3.35□□□□□ -1.87
VCLP18206 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
VCLP18206 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.35□□□□□ -1.87
VCLP18206 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.35□□□□□ -1.87
VCLP18206 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.35□□□□□ -1.87
VCLP18206 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
VCLP18206 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.35□□□□□ -1.87
VCLP18206 USP9YP35-201ENST00000435696 412 ntBASIC3.35□□□□□ -1.87
VCLP18206 ISCA1P2-201ENST00000438679 421 ntBASIC3.35□□□□□ -1.87
VCLP18206 AL645638.1-201ENST00000440519 361 ntBASIC3.35□□□□□ -1.87
VCLP18206 OR6K5P-201ENST00000447050 945 ntBASIC3.35□□□□□ -1.87
VCLP18206 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.35□□□□□ -1.87
VCLP18206 BX322784.1-201ENST00000455793 1077 ntBASIC3.35□□□□□ -1.87
VCLP18206 RPL31P50-201ENST00000471002 296 ntBASIC3.35□□□□□ -1.87
VCLP18206 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 AC112198.1-201ENST00000505369 1220 ntBASIC3.35□□□□□ -1.87
VCLP18206 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 CBX3P3-201ENST00000508108 532 ntBASIC3.35□□□□□ -1.87
VCLP18206 AC007458.1-201ENST00000542812 373 ntBASIC3.35□□□□□ -1.87
VCLP18206 CYCSP2-201ENST00000558168 301 ntBASIC3.35□□□□□ -1.87
VCLP18206 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.35□□□□□ -1.87
VCLP18206 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 BNIP3P40-201ENST00000596017 556 ntBASIC3.35□□□□□ -1.87
VCLP18206 AC013444.2-201ENST00000603317 787 ntBASIC3.35□□□□□ -1.87
VCLP18206 SRGNP1-201ENST00000603392 451 ntBASIC3.35□□□□□ -1.87
VCLP18206 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 AC009974.1-201ENST00000608881 455 ntBASIC3.35□□□□□ -1.87
VCLP18206 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 AL445264.1-201ENST00000621719 171 ntBASIC3.35□□□□□ -1.87
VCLP18206 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.35□□□□□ -1.87
VCLP18206 AC004777.1-201ENST00000624317 287 ntBASIC3.35□□□□□ -1.87
VCLP18206 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.35□□□□□ -1.87
VCLP18206 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.87
VCLP18206 ZNF807-201ENST00000328088 1707 ntBASIC3.34□□□□□ -1.87
VCLP18206 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VCLP18206 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
VCLP18206 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VCLP18206 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms