Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC110774.1-201ENST00000623567 2018 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC011477.1-204ENST00000623416 1325 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 MIR34B-201ENST00000385076 84 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 RNU6-757P-201ENST00000410334 100 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 RPL22P18-201ENST00000417197 377 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC004866.2-201ENST00000438285 481 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC002381.1-201ENST00000447049 280 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 snoU13.22-201ENST00000459428 104 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AC105185.1-201ENST00000518705 535 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFRAP16234 OR6C7P-201ENST00000547875 934 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC011611.1-201ENST00000552179 197 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.53□□□□□ -1.84
PDGFRAP16234 DUXAP1-201ENST00000556632 463 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 NCAPGP2-201ENST00000557911 754 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AL353997.4-201ENST00000586196 166 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AL022099.1-201ENST00000604551 712 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 AL133507.1-201ENST00000605269 557 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 TUG1_1.1-201ENST00000610654 145 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AL049781.1-201ENST00000623195 3585 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.53□□□□□ -1.84
PDGFRAP16234 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFRAP16234 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFRAP16234 AL356274.2-201ENST00000624379 3752 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC058791.1-201ENST00000608412 3198 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RNA5SP387-201ENST00000364226 106 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 MIR135A2-201ENST00000384854 100 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RNU6-882P-201ENST00000391025 103 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RNU1-101P-201ENST00000391171 127 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AL354719.1-201ENST00000406535 843 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RPS15AP38-201ENST00000413110 372 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFRAP16234 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RPS24P7-201ENST00000416921 246 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 MTCO2P21-201ENST00000419780 677 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 MTND1P32-201ENST00000433043 938 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 RPL17P49-201ENST00000443728 411 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFRAP16234 MEMO1P3-201ENST00000459811 302 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC004801.2-202ENST00000463559 283 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC021205.2-201ENST00000480069 347 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC034244.1-201ENST00000507687 207 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 TXNP6-201ENST00000510190 310 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFRAP16234 RN7SKP265-201ENST00000516448 223 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFRAP16234 BBIP1P1-201ENST00000602999 279 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AL596327.1-201ENST00000603629 213 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AC025588.2-201ENST00000604851 466 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 AL110115.1-201ENST00000614396 364 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 AC095031.1-201ENST00000623685 672 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDGFRAP16234 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFRAP16234 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 CR383658.2-201ENST00000547576 1525 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFRAP16234 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFRAP16234 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFRAP16234 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFRAP16234 TAB3P1-202ENST00000452645 1634 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.52□□□□□ -1.85
PDGFRAP16234 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFRAP16234 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms