| MUC1 | P15941 | AC008571.1-201 | ENST00000467232 | 300 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPL23AP11-201 | ENST00000475260 | 469 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | VPS26AP1-201 | ENST00000483197 | 979 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC134050.1-201 | ENST00000495088 | 933 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC104137.1-201 | ENST00000503625 | 385 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC026719.1-201 | ENST00000506059 | 456 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | PAIP2-205 | ENST00000510080 | 858 nt | APPRIS P1 TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC107463.1-202 | ENST00000514526 | 689 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | MTND5P4-201 | ENST00000514978 | 288 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RN7SKP244-201 | ENST00000516513 | 307 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | SNORA48.10-201 | ENST00000516965 | 160 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | OR5G4P-201 | ENST00000525251 | 760 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL138812.1-201 | ENST00000525573 | 471 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | IL18-204 | ENST00000528832 | 795 nt | APPRIS P3 TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AP002004.1-207 | ENST00000531371 | 526 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RERG-IT1-201 | ENST00000539734 | 301 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC004486.1-201 | ENST00000546846 | 233 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | CENPUP2-201 | ENST00000555897 | 1186 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC090695.1-201 | ENST00000561269 | 1222 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL035071.2-201 | ENST00000565572 | 459 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC233702.6-201 | ENST00000584594 | 396 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | LINC01899-203 | ENST00000584810 | 337 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC016866.2-201 | ENST00000585251 | 502 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC009271.1-202 | ENST00000588803 | 492 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC091057.2-201 | ENST00000602594 | 792 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | MTND3P19-201 | ENST00000603825 | 345 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL162274.2-201 | ENST00000614406 | 332 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC074099.1-201 | ENST00000634100 | 679 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | LINC02211-204 | ENST00000642024 | 1070 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC091534.1-201 | ENST00000548779 | 1751 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | CCDC68-201 | ENST00000337363 | 1457 nt | APPRIS P1 TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | LCOR-205 | ENST00000421806 | 16004 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL359893.1-201 | ENST00000447628 | 1580 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | HSFY1-202 | ENST00000309834 | 1038 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | HSFY2-202 | ENST00000344884 | 1038 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | OR5AC2-201 | ENST00000358642 | 930 nt | APPRIS P1 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RNU6-492P-201 | ENST00000363035 | 104 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RNU6-1066P-201 | ENST00000363573 | 105 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RNA5SP387-201 | ENST00000364226 | 106 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | Y_RNA.333-201 | ENST00000365274 | 102 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | Y_RNA.408-201 | ENST00000383987 | 102 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RNU6-1300P-201 | ENST00000391046 | 108 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RNU6-1242P-201 | ENST00000391052 | 103 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL161449.1-201 | ENST00000414531 | 1199 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL049765.1-201 | ENST00000416237 | 573 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPS3AP37-201 | ENST00000419176 | 745 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPL7P44-201 | ENST00000424827 | 742 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC096632.1-201 | ENST00000427395 | 310 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | PSMA2P3-201 | ENST00000429685 | 675 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC022018.1-201 | ENST00000430685 | 241 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | VDAC1P3-201 | ENST00000434069 | 851 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPS29P6-201 | ENST00000438196 | 145 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC092393.1-201 | ENST00000439625 | 742 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPL23AP33-201 | ENST00000442301 | 452 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL671855.1-201 | ENST00000446875 | 1203 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | ARL13A-202 | ENST00000450049 | 1102 nt | APPRIS P1 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC034195.1-202 | ENST00000451031 | 610 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | PLCB1-IT1-202 | ENST00000451443 | 251 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | TBL1XR1-AS1-201 | ENST00000454723 | 414 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | PCCA-AS1-203 | ENST00000455958 | 356 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC027673.1-201 | ENST00000456245 | 405 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | DUXAP8-207 | ENST00000456786 | 622 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC117440.1-201 | ENST00000474107 | 571 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC083906.5-201 | ENST00000503722 | 328 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC104057.1-201 | ENST00000515547 | 497 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC108515.1-201 | ENST00000517407 | 525 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC009812.2-201 | ENST00000517657 | 457 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | IGKV2D-36-201 | ENST00000518643 | 226 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | OR8L1P-201 | ENST00000534005 | 955 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC091053.2-201 | ENST00000534169 | 537 nt | TSL 4 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC007688.2-201 | ENST00000545158 | 369 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL157402.2-201 | ENST00000566394 | 416 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | MTND1P8-201 | ENST00000571424 | 950 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | MIR3912-201 | ENST00000577566 | 105 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC138761.3-201 | ENST00000579993 | 334 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | GAS5-AS1-201 | ENST00000602767 | 694 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RPP40P2-201 | ENST00000603596 | 712 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC106052.1-201 | ENST00000608029 | 497 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC110609.1-201 | ENST00000608228 | 303 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC009974.1-201 | ENST00000608881 | 455 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | DUXAP10-204 | ENST00000612052 | 616 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL050303.3-201 | ENST00000613704 | 284 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | KLRC2-206 | ENST00000619500 | 883 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AC091046.2-201 | ENST00000620775 | 665 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL512506.2-201 | ENST00000624472 | 458 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AP000676.4-201 | ENST00000624659 | 623 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | MIR4496-201 | ENST00000635896 | 61 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | GPBP1-201 | ENST00000264779 | 1786 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | AL445259.1-201 | ENST00000587106 | 2984 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | ZMYM2-203 | ENST00000382874 | 10139 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| MUC1 | P15941 | PMS1-215 | ENST00000447232 | 2576 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| MUC1 | P15941 | KIAA0825-203 | ENST00000513200 | 4942 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| MUC1 | P15941 | HMGN5-201 | ENST00000358130 | 2126 nt | APPRIS P2 TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| MUC1 | P15941 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| MUC1 | P15941 | SNORA9.2-201 | ENST00000365361 | 133 nt | BASIC | 2.49 | □□□□□ -2.01 | | |