Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HOXC6P09630 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 UBE2FP3-201ENST00000436366 524 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AP001486.1-201ENST00000463339 476 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXC6P09630 IGHV3-32-201ENST00000519182 355 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AC027309.2-201ENST00000520566 192 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC6P09630 DEFB131D-201ENST00000526803 184 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 CYCSP2-201ENST00000558168 301 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC009063.1-201ENST00000563342 702 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AL606834.2-201ENST00000602954 668 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC6P09630 AC126118.1-201ENST00000607744 628 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 AL355073.2-201ENST00000612106 557 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 U6atac.1-201ENST00000616025 117 ntBASIC3.98□□□□□ -1.77
HOXC6P09630 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC6P09630 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC6P09630 AL035425.3-201ENST00000564206 4996 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 GDI2P1-201ENST00000429312 1336 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXC6P09630 SAGE2P-201ENST00000420011 2126 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 DBF4P1-201ENST00000412976 1892 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC6P09630 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC6P09630 RNU5F-6P-201ENST00000362979 116 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 RNU6-251P-201ENST00000363235 104 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 RNU6-1279P-201ENST00000383917 103 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 HMGN2P8-201ENST00000391458 268 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 SNRPEP2-201ENST00000397592 279 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL122016.1-201ENST00000403365 367 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 MTCO3P31-201ENST00000405526 789 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 ZNF603P-201ENST00000405613 487 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 U3.39-201ENST00000408569 239 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC6P09630 AC017079.2-201ENST00000416102 485 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 RPL21P109-201ENST00000422213 475 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL953862.1-201ENST00000423016 168 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC6P09630 AF228730.2-201ENST00000438784 848 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 AL831737.1-201ENST00000441288 271 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC239809.1-201ENST00000450470 217 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 TRGVB-201ENST00000453257 471 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL121877.1-201ENST00000453704 622 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 S100A11P1-201ENST00000477525 312 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 VWA8P1-201ENST00000510889 176 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AF131216.2-201ENST00000512316 564 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC023141.12-201ENST00000512399 199 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC116347.2-201ENST00000514912 523 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC6P09630 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC6P09630 AL133241.1-201ENST00000556832 487 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC234778.2-201ENST00000566241 354 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC6P09630 AC136618.2-201ENST00000575091 400 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 MIR5680-201ENST00000577577 84 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC006557.5-201ENST00000603126 811 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 SEPT7P9-203ENST00000604116 343 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AP002360.4-201ENST00000606980 481 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC011816.2-201ENST00000607089 556 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL355816.1-201ENST00000607951 118 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AC007684.1-201ENST00000609671 477 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 AL589743.7-201ENST00000612637 233 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC6P09630 SEPT14P19-203ENST00000633205 211 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC6P09630 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC6P09630 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC6P09630 AC134882.1-201ENST00000603738 1676 ntBASIC3.97□□□□□ -1.77
HOXC6P09630 OR11H5P-202ENST00000641612 1325 ntBASIC3.96□□□□□ -1.77
HOXC6P09630 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.96□□□□□ -1.77
HOXC6P09630 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms