Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL1P09341 FABP5P3-201ENST00000437960 408 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 PGBD4P3-201ENST00000440731 581 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 RPS24P13-201ENST00000442520 397 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL1P09341 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC233279.1-201ENST00000455300 423 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC093663.2-201ENST00000484625 313 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC074250.1-201ENST00000511117 192 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 SNORA67.7-201ENST00000516664 135 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 OR8K4P-201ENST00000534608 872 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL1P09341 CKS1BP1-201ENST00000555221 240 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 HMGB1P14-201ENST00000557424 591 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC079089.3-201ENST00000603094 673 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 VN1R74P-201ENST00000613259 503 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC107905.1-201ENST00000616204 426 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC068722.2-201ENST00000618734 544 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC012314.7-201ENST00000619693 93 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 MFSD8-245ENST00000641743 948 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.84□□□□□ -2.12
CXCL1P09341 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CXCL1P09341 MTND5P1-201ENST00000445440 1375 ntBASIC1.84□□□□□ -2.12
CXCL1P09341 AC007342.9-201ENST00000623877 1385 ntBASIC1.84□□□□□ -2.12
CXCL1P09341 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CXCL1P09341 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CXCL1P09341 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CXCL1P09341 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC016717.2-201ENST00000609089 5141 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 RNU6-461P-201ENST00000364195 107 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 RNU1-112P-201ENST00000364401 164 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 SNORD114-30-201ENST00000364448 72 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 OR5H15-201ENST00000383696 930 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 SNORA18.3-201ENST00000384122 132 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.83□□□□□ -2.12
CXCL1P09341 TATDN1P1-201ENST00000414123 891 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 RPL27AP8-201ENST00000424277 446 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 IPO7P1-201ENST00000442031 636 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL1P09341 RAB11AP1-201ENST00000442978 646 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 MORF4L1P4-201ENST00000450245 976 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC104073.1-201ENST00000451988 151 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC113155.1-201ENST00000511141 769 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC096725.1-201ENST00000514266 313 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 RNA5SP341-201ENST00000516261 117 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 SNORA70.16-201ENST00000516390 95 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 RNU6-889P-201ENST00000517189 103 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC068339.2-201ENST00000534395 618 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.83□□□□□ -2.12
CXCL1P09341 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC025281.1-201ENST00000567026 265 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC012254.4-201ENST00000588843 273 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC125494.3-201ENST00000602759 455 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 NRBF2P5-201ENST00000603087 788 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC067747.1-201ENST00000608026 250 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AL161629.2-201ENST00000615347 275 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC025588.4-201ENST00000615802 908 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 AC020763.5-201ENST00000623298 430 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC027309.3-201ENST00000623419 351 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CXCL1P09341 AL109809.4-201ENST00000603520 2185 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CXCL1P09341 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CXCL1P09341 MTND5P31-201ENST00000419366 1374 ntBASIC1.83□□□□□ -2.12
CXCL1P09341 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CXCL1P09341 MTND4P1-201ENST00000457501 1466 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL1P09341 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL1P09341 SNORD62.1-201ENST00000362541 86 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 Y_RNA.126-201ENST00000363382 111 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RNU6-1072P-201ENST00000384703 107 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 RNU6-443P-201ENST00000384780 107 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 ATP5F1P3-201ENST00000397213 657 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 AL356057.3-201ENST00000402607 340 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL1P09341 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL1P09341 AC004866.2-201ENST00000438285 481 ntBASIC1.82□□□□□ -2.12
CXCL1P09341 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL1P09341 RSL24D1P3-201ENST00000449255 495 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms